HHsearch alignment of GI: 254780297 and MMDB domain: 3cpm_A_1-172

>3cpm_A (A:1-172) Peptide deformylase, chloroplast; alpha beta, hydrolase, iron, metal-binding, plastid, protein biosynthesis, transit peptide; 2.40A {Arabidopsis thaliana}
Probab=100.00  E-value=0  Score=380.21  Aligned_cols=158  Identities=37%  Similarity=0.627  Sum_probs=154.6

Q ss_pred             CCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEHHHCCCCCEEEEECCCCCCCCCCCEECCCCC
Q ss_conf             98773645769310521213787888999999999986500476421302201440003773164323348210016442
Q gi|254780297|r    1 MVKKPLVIFPDPILRRVSRPIEKINSDIMNLIDNMLEVMYSTDGIGLAAVQIGVLYRLVVIDLQDHAHRKNPMVFINPKI   80 (170)
Q Consensus         1 M~~~~Iv~~~dp~L~~~~~~v~~~~~~~~~li~dm~~tm~~~~GvGLAA~QIG~~~ri~vv~~~~~~~~~~~~~~iNP~I   80 (170)
                      |++++|++||||+|+++|.||+.++++++++++||++||++++|+||||||||+++|+|+++.+++.+...+.+||||+|
T Consensus        14 m~i~~Iv~~~d~~L~~~a~~V~~~~~~~~~li~dm~~tm~~~~gvGLAApQIG~~~ri~vi~~~~~~~~~~~~v~INP~I   93 (172)
T 3cpm_A           14 ETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKI   93 (172)
T ss_dssp             CSSCCCCCTTCGGGTSCCBCCCCCSHHHHHHHHHHHHHHHHTTCSEEEGGGGTCCBSEEEECSSCSTTSSCCEEEEEEEE
T ss_pred             CCCCCEEECCCHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf             35641767899799762731687998999999999999987286674552664102234323012332111221235444


Q ss_pred             CCHHHHHHHHHHHCCCCCCCCHHHHHCCHHEEEEECCCCCEEEEEEECCEEEEEEEEHHHHCCEEEEEECCHHHHHHH
Q ss_conf             010000011100000122321012110000024632358557999729764643270013197685364788999999
Q gi|254780297|r   81 ITFSDDFSVYQEGCLSIPDYRADVKRSAFITVRYMDCNAQHQIIYADGLLATCLQHELDHLNGILFIDHLSRLKRDMI  158 (170)
Q Consensus        81 ~~~s~e~~~~~EGCLS~Pg~~~~V~R~~~I~v~~~d~~G~~~~~~~~g~~Ar~~QHEiDHL~G~lf~drls~~kr~~~  158 (170)
                      ++.|+++..+||||||+||+++.|+||.+|+|+|+|++|++++.+++||+|||+|||+|||||+||+||+++.+++++
T Consensus        94 ~~~s~~~~~~~EgClS~p~~~~~V~R~~~I~v~y~d~~G~~~~~~~~G~~Ar~~QHEiDHL~G~l~~Drl~~~~~~~~  171 (172)
T 3cpm_A           94 KKYSDKLVPFDEGCLSFPGIYAEVVRPQSVKIDARDITGERFSISLSRLPARIFQHEYDHLEGVLFFDRMTDQVLDSI  171 (172)
T ss_dssp             EEECSSEEEEEECCTTSTTCCEEEEEESCEEEEEECTTSCEEEEEECHHHHHHHHHHHHHHTTCCGGGGSCHHHHHTT
T ss_pred             CCCCCCEEECCCCCCCCCCCCCEECCCCEEEEEEECCCCCEEEEEEECCEEEEEEEHHHHCCCEEHHHHCCHHHHHHH
T ss_conf             357876787246655566422100010016887641479678899814635678874351378737885598899999