HHsearch results for GI: 254780297 and protein with PDBid: 1n5n_A
>1n5n_A Peptide deformylase; metalloenzyme, drug design, deformylation, hydrolase; 1.80A {Pseudomonas aeruginosa} SCOP: d.167.1.1 PDB: 1s17_A* 1ix1_A* 1lry_A*
Probab=100.00 E-value=0 Score=396.25 Aligned_cols=167 Identities=44% Similarity=0.773 Sum_probs=161.0
Q ss_pred CCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEHHHCCCCCEEEEECCCCCCCCCCCEECCCCC
Q ss_conf 98773645769310521213787888999999999986500476421302201440003773164323348210016442
Q gi|254780297|r 1 MVKKPLVIFPDPILRRVSRPIEKINSDIMNLIDNMLEVMYSTDGIGLAAVQIGVLYRLVVIDLQDHAHRKNPMVFINPKI 80 (170)
Q Consensus 1 M~~~~Iv~~~dp~L~~~~~~v~~~~~~~~~li~dm~~tm~~~~GvGLAA~QIG~~~ri~vv~~~~~~~~~~~~~~iNP~I 80 (170)
|++++|++||||+||++|.||+.++++++++++||++||++++|+||||||||+++|+||++.++.. ..+.+||||+|
T Consensus 13 Mai~~Iv~~~dpiLr~~~~~v~~~~~~i~~li~dM~~tm~~~~GvGLAApQIGi~~ri~vv~~~~~~--~~~~v~iNP~I 90 (180)
T 1n5n_A 13 MAILNILEFPDPRLRTIAKPVEVVDDAVRQLIDDMFETMYEAPGIGLAATQVNVHKRIVVMDLSEDK--SEPRVFINPEF 90 (180)
T ss_dssp CCCCCCCCTTCGGGGCBCBCCSCCCHHHHHHHHHHHHHHHHTTCSEEEGGGGTCCBSEEEEECSTTS--CCEEEEEEEEE
T ss_pred CCCCCCCCCCCHHHHCCCEECCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCEECCEEEEECCCCC--CCCEEEECCEE
T ss_conf 5334327289979937051389699899999999999999779960022223000154876337556--78459989887
Q ss_pred CCHHHHHHHHHHHCCCCCCCCHHHHHCCHHEEEEECCCCCEEEEEEECCEEEEEEEEHHHHCCEEEEEECCHHHHHHHHH
Q ss_conf 01000001110000012232101211000002463235855799972976464327001319768536478899999999
Q gi|254780297|r 81 ITFSDDFSVYQEGCLSIPDYRADVKRSAFITVRYMDCNAQHQIIYADGLLATCLQHELDHLNGILFIDHLSRLKRDMITK 160 (170)
Q Consensus 81 ~~~s~e~~~~~EGCLS~Pg~~~~V~R~~~I~v~~~d~~G~~~~~~~~g~~Ar~~QHEiDHL~G~lf~drls~~kr~~~~~ 160 (170)
++.|+++..++|||||+||+++.|.||.+|+|+|+|.+|++++.+++||+|||||||+|||||+||+||+++++|.++.+
T Consensus 91 ~~~s~~~~~~~EGCLS~Pg~~~~V~R~~~I~v~y~d~~G~~~~~~~~G~~Ar~~QHEiDHL~Gilf~Drl~~~~~~~~~k 170 (180)
T 1n5n_A 91 EPLTEEMDQYQEGCLSVPGFYENVDRPQKVRIKALDRDGNPFEEVAEGLLAVCIQHECDHLNGKLFVDYLSTLKRDRIRK 170 (180)
T ss_dssp EESCSCEEEEEECCTTSTTCCEEEEEESCEEEEEECTTSCEEEEEECHHHHHHHHHHHHHHBTCCGGGGSCHHHHHHHHH
T ss_pred ECCCCCEEEECCCCCCCCCCEEEEECHHHHEEEEECCCCCEEEEEEEEHHEEHHHHHHHHHCCEEHHHCCCHHHHHHHHH
T ss_conf 33687566513654357998010277588346678789989999996420312314668759992133049989999999
Q ss_pred HHHHHHHHC
Q ss_conf 999998504
Q gi|254780297|r 161 KMSKLVQLR 169 (170)
Q Consensus 161 k~~k~~k~k 169 (170)
|++|+.|.+
T Consensus 171 k~~k~~k~~ 179 (180)
T 1n5n_A 171 KLEKQHRQQ 179 (180)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHC
T ss_conf 999988622