HHsearch results for GI: 254780297 and protein with PDBid: 1rl4_A
>1rl4_A Formylmethionine deformylase; crystal engineering, drug design, malaria, PDF, peptide deformylase, hydrolase; HET: BRR BL5; 2.18A {Plasmodium falciparum 3D7} SCOP: d.167.1.1 PDB: 1rqc_A 1jym_A
Probab=100.00 E-value=0 Score=375.44 Aligned_cols=167 Identities=32% Similarity=0.616 Sum_probs=158.4
Q ss_pred CCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEHHHCCCCCEEEEECCCCCC-CCCCCEECCCCCC
Q ss_conf 773645769310521213787888999999999986500476421302201440003773164323-3482100164420
Q gi|254780297|r 3 KKPLVIFPDPILRRVSRPIEKINSDIMNLIDNMLEVMYSTDGIGLAAVQIGVLYRLVVIDLQDHAH-RKNPMVFINPKII 81 (170)
Q Consensus 3 ~~~Iv~~~dp~L~~~~~~v~~~~~~~~~li~dm~~tm~~~~GvGLAA~QIG~~~ri~vv~~~~~~~-~~~~~~~iNP~I~ 81 (170)
.++|++||||+|+++|.||+.+++++++++++|++||++++|+||||||||+++|+||++..+... ...+.+++||.|+
T Consensus 8 ~lkIv~~~dpiLr~~~~~v~~~~~~~~~li~dm~~tm~~~~GvGLAA~QIG~~~rifvi~~~~~~~~~~~~~~~iNp~ii 87 (188)
T 1rl4_A 8 EIKIVKYPDPILRRRSEEVTNFDDNLKRVVRKMFDIMYESKGIGLSAPQVNISKRIIVWNALYEKRKEENERIFINPSIV 87 (188)
T ss_dssp --CCCCTTCGGGGSCCBCCCCCSHHHHHHHHHHHHHHHHTTCSEEEGGGGTCCBSEEEEC-----------CEEEEEEEE
T ss_pred CCCEEECCCHHHHCCCEECCCCCHHHHHHHHHHHHHHHHCCCCEEEHHHCCCCHHHCCCCCCCCCCCCCCCEEEECCCCC
T ss_conf 76277689979966161489899899999999999998789919887776950320012565211235575588768865
Q ss_pred CHHHHHHHHHHHCCCCCCCCHHHHHCCHHEEEEECCCCCEEEEEEECCEEEEEEEEHHHHCCEEEEEECCHHHHHHHHHH
Q ss_conf 10000011100000122321012110000024632358557999729764643270013197685364788999999999
Q gi|254780297|r 82 TFSDDFSVYQEGCLSIPDYRADVKRSAFITVRYMDCNAQHQIIYADGLLATCLQHELDHLNGILFIDHLSRLKRDMITKK 161 (170)
Q Consensus 82 ~~s~e~~~~~EGCLS~Pg~~~~V~R~~~I~v~~~d~~G~~~~~~~~g~~Ar~~QHEiDHL~G~lf~drls~~kr~~~~~k 161 (170)
..|+++...+||||||||+++.|+||.+|+|+|+|.+|++++.+++||+|||||||+|||||++|+||+|+.++++++++
T Consensus 88 ~~s~~~~~~~EgCLS~Pg~~~~V~R~~~I~v~y~d~~G~~~~~~~~G~~Ar~~QHEiDHL~Gilf~Drl~~~~~~~~~kk 167 (188)
T 1rl4_A 88 EQSLVKLKLIEGCLSFPGIEGKVERPSIVSISYYDINGYKHLKILKGIHSRIFQHEFDHLNGTLFIDKMTQVDKKKVRPK 167 (188)
T ss_dssp EECSCEEEEEECCTTSTTCCEEEEEESCEEEEEECTTSCEEEEEECHHHHHHHHHHHHHHTTCCGGGGBCHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEECEEEEEEEHHHHHCCEEEHHHCCHHHHHHHHHH
T ss_conf 66750575367602468965433401316899980665357899962334530614486688850441799899999999
Q ss_pred HHHHHHHC
Q ss_conf 99998504
Q gi|254780297|r 162 MSKLVQLR 169 (170)
Q Consensus 162 ~~k~~k~k 169 (170)
++|+.|..
T Consensus 168 ~~~~~k~~ 175 (188)
T 1rl4_A 168 LNELIRDY 175 (188)
T ss_dssp HHHHHHC-
T ss_pred HHHHHHHH
T ss_conf 99999988