HHsearch results for GI: 254780297 and protein with PDBid: 2aia_A
>2aia_A Peptide deformylase; hydrolase; HET: SB8; 1.70A {Streptococcus pneumoniae} PDB: 2ai7_A* 2aie_P* 1lm6_A 2os3_A*
Probab=100.00 E-value=0 Score=357.20 Aligned_cols=161 Identities=28% Similarity=0.412 Sum_probs=137.8
Q ss_pred CCCCCHHHCCCCCCCCCCCCCCCCCH--------HHHHHHHH-----HHHHHHHCCCCCEEEHHHCCCCCEEEEECCCCC
Q ss_conf 98773645769310521213787888--------99999999-----998650047642130220144000377316432
Q gi|254780297|r 1 MVKKPLVIFPDPILRRVSRPIEKINS--------DIMNLIDN-----MLEVMYSTDGIGLAAVQIGVLYRLVVIDLQDHA 67 (170)
Q Consensus 1 M~~~~Iv~~~dp~L~~~~~~v~~~~~--------~~~~li~d-----m~~tm~~~~GvGLAA~QIG~~~ri~vv~~~~~~ 67 (170)
|++++|+++|||+||++|+||+.+.+ ++.+++++ |.+||++++||||||||||+++|+|+++.++..
T Consensus 14 ~~i~~Iv~~g~p~Lr~~a~~V~~~~~~~~~~~~~~~~~~i~d~~~~~m~~tm~~~~GvGLAApQIGi~~ri~vv~~~~~~ 93 (203)
T 2aia_A 14 IDMCDIIREGNPSLRTVAEEVTFPLSDQEIILGEKMMQFLKHSQDPVMAEKMGLRGGVGLAAPQLDISKRIIAVLVPNIV 93 (203)
T ss_dssp CCGGGSCCTTCGGGGSCCBCCCSSCCHHHHHHHHHHHHHHHHHTCHHHHHHHTCCCCSEEEGGGGTCCBSEEEEEEEC--
T ss_pred CCHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCCCH
T ss_conf 77633200899799387702588875788888999999998620378999887679959850212875118999847712
Q ss_pred C--------CCCCCEECCCCCCCHHHH--HHHHHHHCCCCC-CCCHHHHHCCHHEEEEECCCCCEEEEEEECCEEEEEEE
Q ss_conf 3--------348210016442010000--011100000122-32101211000002463235855799972976464327
Q gi|254780297|r 68 H--------RKNPMVFINPKIITFSDD--FSVYQEGCLSIP-DYRADVKRSAFITVRYMDCNAQHQIIYADGLLATCLQH 136 (170)
Q Consensus 68 ~--------~~~~~~~iNP~I~~~s~e--~~~~~EGCLS~P-g~~~~V~R~~~I~v~~~d~~G~~~~~~~~g~~Ar~~QH 136 (170)
. ...+.+||||+|++.|.+ +...+|||||+| |+++.|+||.+|+|+|+|.+|++++.+++||+||||||
T Consensus 94 ~~~~~~~~~~~~~~vlINP~Ii~~s~~~~~~~~~EGCLS~P~~~~g~V~R~~~I~v~y~d~~G~~~~~~~~G~~Ar~~QH 173 (203)
T 2aia_A 94 EEGETPQEAYDLEAIMYNPKIVSHSVQDAALGEGEGCLSVDRNVPGYVVRHARVTVDYFDKDGEKHRIKLKGYNSIVVQH 173 (203)
T ss_dssp --------CEEEEEEEEEEEEEEECSSEEEETTCCCCTTCCSCCCSCBCEESCEEEEEECTTSCEEEEEECHHHHHHHHH
T ss_pred HCCCCCCCCCCCCCEEECCCEEECCCCCEEEEECCCCCCCCCCCCEEEEEEEEEEEEEECCCCCEEEEEEECHHHHHHHH
T ss_conf 10568433456661578883310256540452025763667677148998899999999799999999993567778978
Q ss_pred EHHHHCCEEEEEECCHHHHHHHHHH
Q ss_conf 0013197685364788999999999
Q gi|254780297|r 137 ELDHLNGILFIDHLSRLKRDMITKK 161 (170)
Q Consensus 137 EiDHL~G~lf~drls~~kr~~~~~k 161 (170)
|+|||+|+||+||+|+.++..++++
T Consensus 174 EiDHL~G~Lf~Drls~~~~~~~~~~ 198 (203)
T 2aia_A 174 EIDHINGIMFYDRINEKDPFAVKDG 198 (203)
T ss_dssp HHHHHTTCCGGGGBCSSCTTCCCTT
T ss_pred HHHHCCCEECCEEECCCCHHHHHHH
T ss_conf 8780088801211083434667766