HHsearch results for GI: 254780297 and protein with PDBid: 2w3t_A
>2w3t_A Peptide deformylase; protein biosynthesis, iron, nickel, hydrolase, metal-binding; 1.69A {Escherichia coli} PDB: 2w3u_A
Probab=100.00 E-value=0 Score=390.58 Aligned_cols=165 Identities=42% Similarity=0.735 Sum_probs=156.6
Q ss_pred CCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEHHHCCCCCEEEEECCCCCCCCCCCEECCCCCC
Q ss_conf 87736457693105212137878889999999999865004764213022014400037731643233482100164420
Q gi|254780297|r 2 VKKPLVIFPDPILRRVSRPIEKINSDIMNLIDNMLEVMYSTDGIGLAAVQIGVLYRLVVIDLQDHAHRKNPMVFINPKII 81 (170)
Q Consensus 2 ~~~~Iv~~~dp~L~~~~~~v~~~~~~~~~li~dm~~tm~~~~GvGLAA~QIG~~~ri~vv~~~~~~~~~~~~~~iNP~I~ 81 (170)
|+++|++||||+||++|.||+.++++++++++||++||++++|+||||||||+++|+||+++.+.. +.+.+||||+|+
T Consensus 1 ail~Iv~~pdpiLr~~a~~v~~~~~~l~~li~dM~~tm~~~~GvGLAApQIGi~~ri~vi~~~~~~--~~~~v~iNP~Ii 78 (188)
T 2w3t_A 1 SVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENR--DERLVLINPELL 78 (188)
T ss_dssp CCCCCCCTTCGGGGCCCBCCSCCCHHHHHHHHHHHHHHHHTTCSEEEGGGGTCCBSEEEECCCTTS--CCCEEEEEEEEE
T ss_pred CCCCEEECCCHHHHCCCEECCCCCHHHHHHHHHHHHHHHHCCCCEEEHHHCCCCCCEEEEECHHCC--CCCEEEECCEEE
T ss_conf 963300479869948272289799899999999999998689909767666945034775020116--883597797740
Q ss_pred CHHHHHHHHHHHCCCCCCCCHHHHHCCHHEEEEECCCCCEEEEEEECCEEEEEEEEHHHHCCEEEEEECCHHHHHHHHHH
Q ss_conf 10000011100000122321012110000024632358557999729764643270013197685364788999999999
Q gi|254780297|r 82 TFSDDFSVYQEGCLSIPDYRADVKRSAFITVRYMDCNAQHQIIYADGLLATCLQHELDHLNGILFIDHLSRLKRDMITKK 161 (170)
Q Consensus 82 ~~s~e~~~~~EGCLS~Pg~~~~V~R~~~I~v~~~d~~G~~~~~~~~g~~Ar~~QHEiDHL~G~lf~drls~~kr~~~~~k 161 (170)
+.|+++ .+||||||+||+++.|+||.+|+|+|+|.+|++++.+++||+|||||||+|||+|+||+||+|+++|+++.+|
T Consensus 79 ~~s~~~-~~~EGCLS~Pg~~~~V~R~~~I~v~~~d~~G~~~~~~~~G~~Ar~iQHEiDHL~G~lf~Dr~s~~k~~~~~kk 157 (188)
T 2w3t_A 79 EKSGET-GIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQK 157 (188)
T ss_dssp EEESCE-EEEECCTTSTTCCEEEEECSEEEEEEECTTSCEEEEEEEHHHHHHHHHHHHHHTTCCGGGGSCHHHHHHHHHH
T ss_pred CCCCCC-CCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEEEEEEEHHHHHHHHCCEEHHHCCCHHHHHHHHHH
T ss_conf 467820-2540554777852354452099999984799699999985217734334787588820321699899999999
Q ss_pred HHHHHHHC
Q ss_conf 99998504
Q gi|254780297|r 162 MSKLVQLR 169 (170)
Q Consensus 162 ~~k~~k~k 169 (170)
++|+.|.+
T Consensus 158 ~~k~~~~~ 165 (188)
T 2w3t_A 158 VEKLDRLK 165 (188)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
T ss_conf 99999877