HHsearch results for GI: 254780297 and protein with PDBid: 3cpm_A

>3cpm_A Peptide deformylase, chloroplast; alpha beta, hydrolase, iron, metal-binding, plastid, protein biosynthesis, transit peptide; 2.40A {Arabidopsis thaliana}
Probab=100.00  E-value=0  Score=390.73  Aligned_cols=168  Identities=35%  Similarity=0.602  Sum_probs=161.7

Q ss_pred             CCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEHHHCCCCCEEEEECCCCCCCCCCCEECCCCC
Q ss_conf             98773645769310521213787888999999999986500476421302201440003773164323348210016442
Q gi|254780297|r    1 MVKKPLVIFPDPILRRVSRPIEKINSDIMNLIDNMLEVMYSTDGIGLAAVQIGVLYRLVVIDLQDHAHRKNPMVFINPKI   80 (170)
Q Consensus         1 M~~~~Iv~~~dp~L~~~~~~v~~~~~~~~~li~dm~~tm~~~~GvGLAA~QIG~~~ri~vv~~~~~~~~~~~~~~iNP~I   80 (170)
                      |+.++|++||||+||++|.+|+.++++++++++||++||++++|+||||||||+++|+||++..+......+.++|||+|
T Consensus        14 ~~~l~Iv~~~dpiLr~~~~~v~~~~~~~~~li~dM~~tm~~~~GvGLAApQIG~~~ri~vi~~~~~~~~~~~~v~iNP~I   93 (193)
T 3cpm_A           14 ETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKI   93 (193)
T ss_dssp             CSSCCCCCTTCGGGTSCCBCCCCCSHHHHHHHHHHHHHHHHTTCSEEEGGGGTCCBSEEEECSSCSTTSSCCEEEEEEEE
T ss_pred             CCCCEEEECCCHHHHCCCEECCCCCHHHHHHHHHHHHHHHHCCCCEEEHHHCCCHHHHEEECCCCCCCCCCCCCCCCCEE
T ss_conf             67840777899799371634787898999999999999987898174476629325511330231234552100244133


Q ss_pred             CCHHHHHHHHHHHCCCCCCCCHHHHHCCHHEEEEECCCCCEEEEEEECCEEEEEEEEHHHHCCEEEEEECCHHHHHHHHH
Q ss_conf             01000001110000012232101211000002463235855799972976464327001319768536478899999999
Q gi|254780297|r   81 ITFSDDFSVYQEGCLSIPDYRADVKRSAFITVRYMDCNAQHQIIYADGLLATCLQHELDHLNGILFIDHLSRLKRDMITK  160 (170)
Q Consensus        81 ~~~s~e~~~~~EGCLS~Pg~~~~V~R~~~I~v~~~d~~G~~~~~~~~g~~Ar~~QHEiDHL~G~lf~drls~~kr~~~~~  160 (170)
                      ++.|+++..++|||||+||+++.|.||.+|+|+|+|++|++++.+++||+|||||||+|||||+||+||+++.++..+.+
T Consensus        94 ~~~s~~~~~~~EgCLS~Pg~~~~V~R~~~I~v~y~d~~G~~~~~~~~g~~Ar~~QHEiDHL~Gilf~Drl~~~~~~~~~k  173 (193)
T 3cpm_A           94 KKYSDKLVPFDEGCLSFPGIYAEVVRPQSVKIDARDITGERFSISLSRLPARIFQHEYDHLEGVLFFDRMTDQVLDSIRE  173 (193)
T ss_dssp             EEECSSEEEEEECCTTSTTCCEEEEEESCEEEEEECTTSCEEEEEECHHHHHHHHHHHHHHTTCCGGGGSCHHHHHTTHH
T ss_pred             ECCCCCEEEECCCCCCCCCCCEEEECCCEEEEEEEECCCCEEEEEEECCEEEEEEEHHHHHCCEEHHHHCCHHHHHHHHH
T ss_conf             30477089812455678998537876406999998278989999997464777544357637883478559889999999


Q ss_pred             HHHHHHHH
Q ss_conf             99999850
Q gi|254780297|r  161 KMSKLVQL  168 (170)
Q Consensus       161 k~~k~~k~  168 (170)
                      +++|+.+.
T Consensus       174 ~~~k~~k~  181 (193)
T 3cpm_A          174 ELEALEKK  181 (193)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
T ss_conf             99999998