HHSEARCH alignment of GI: 254780297 and SCOP domain: d1xeoa1

Alignment
>d1xeoa1 d.167.1.1 (A:1-164) Peptide deformylase {Escherichia coli [TaxId: 562]}
Probab=100.00  E-value=0  Score=388.82  Aligned_cols=164  Identities=42%  Similarity=0.734  Sum_probs=155.6

Q ss_pred             CCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEHHHCCCCCEEEEECCCCCCCCCCCEECCCCCC
Q ss_conf             87736457693105212137878889999999999865004764213022014400037731643233482100164420
Q gi|254780297|r    2 VKKPLVIFPDPILRRVSRPIEKINSDIMNLIDNMLEVMYSTDGIGLAAVQIGVLYRLVVIDLQDHAHRKNPMVFINPKII   81 (170)
Q Consensus         2 ~~~~Iv~~~dp~L~~~~~~v~~~~~~~~~li~dm~~tm~~~~GvGLAA~QIG~~~ri~vv~~~~~~~~~~~~~~iNP~I~   81 (170)
                      ++++|++||||+||++|.||+.+|++++++++||++||++++|+||||||||+++|+||++..+..  +.+.+||||+|+
T Consensus         1 ~v~~I~~~~dp~Lr~~a~~v~~~~~~~~~li~dm~~tm~~~~GvGLAApQIG~~~rifvv~~~~~~--~~~~v~iNP~I~   78 (164)
T d1xeoa1           1 SVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENR--DERLVLINPELL   78 (164)
T ss_dssp             CCCCCCCTTCGGGGCCCBCCSCCCHHHHHHHHHHHHHHHHTTCSEEEGGGGTCCBSEEEECCCTTS--CCCEEEEEEEEE
T ss_pred             CCCCHHCCCCHHHHCCCEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEHHHCCCCCEEEEEEECCC--CCEEEECCCEEE
T ss_conf             955410379869968373589799899999999999764227610130220222045899740256--743884472776


Q ss_pred             CHHHHHHHHHHHCCCCCCCCHHHHHCCHHEEEEECCCCCEEEEEEECCEEEEEEEEHHHHCCEEEEEECCHHHHHHHHHH
Q ss_conf             10000011100000122321012110000024632358557999729764643270013197685364788999999999
Q gi|254780297|r   82 TFSDDFSVYQEGCLSIPDYRADVKRSAFITVRYMDCNAQHQIIYADGLLATCLQHELDHLNGILFIDHLSRLKRDMITKK  161 (170)
Q Consensus        82 ~~s~e~~~~~EGCLS~Pg~~~~V~R~~~I~v~~~d~~G~~~~~~~~g~~Ar~~QHEiDHL~G~lf~drls~~kr~~~~~k  161 (170)
                      +.|++. .++|||||+||+++.|+||.+|+|+|+|.+|++++.+++||+|||+|||+|||+|+||+||+|+.+|.++.+|
T Consensus        79 ~~~~~~-~~~EgCLS~Pg~~~~V~R~~~I~v~y~d~~G~~~~~~~~g~~Ar~~QHEiDHL~Gilf~Dr~~~~~~~~~~kk  157 (164)
T d1xeoa1          79 EKSGET-GIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQK  157 (164)
T ss_dssp             EEECCB-CCEECCTTSTTCCEECCBCSEEEEEEECTTSCEEEEEECHHHHHHHHHHHHHHTTCCGGGGSCHHHHHHHHHH
T ss_pred             EECCEE-EECCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEEEEHHHHHHHHHCCEEHHHHCCHHHHHHHHHH
T ss_conf             312214-3048864212112445543278999986899899999954002148777898688923663699899999999


Q ss_pred             HHHHHHH
Q ss_conf             9999850
Q gi|254780297|r  162 MSKLVQL  168 (170)
Q Consensus       162 ~~k~~k~  168 (170)
                      ++|+.|.
T Consensus       158 ~~k~~rl  164 (164)
T d1xeoa1         158 VEKLDRL  164 (164)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHCC
T ss_conf             9986459


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Peptide deformylase
superfamily: Peptide deformylase
family: Peptide deformylase
domain: Peptide deformylase
species: Escherichia coli [TaxId: 562]