PSIBLAST alignment of GI: 254780297 and protein with PDB id: 1lqw
gi|22219285|pdb|1LQW|A Chain A, Crystal Structure Of S.Aureus Peptide Deformylase Length = 183
>gi|22219286|pdb|1LQW|B Chain B, Crystal Structure Of S.Aureus Peptide Deformylase Length = 183
>gi|75766236|pdb|2AI9|A Chain A, S.Aureus Polypeptide Deformylase Length = 183
>gi|75766237|pdb|2AI9|B Chain B, S.Aureus Polypeptide Deformylase Length = 183
Score = 88.3 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 36/168 (21%), Positives = 64/168 (38%), Gaps = 17/168 (10%)
Query: 2 VKKPLVIFPDPILRRVSRPIE-KINSDIMNLIDNMLEVMYSTDGI------------GLA 48
K ++ P LR+ + +E + + + M E + ++ GLA
Sbjct: 3 TMKDIIRDGHPTLRQKAAELELPLTKEEKETLIAMREFLVNSQDEEIAKRYGLRSGVGLA 62
Query: 49 AVQIGVLYRLVVIDLQDHAHRKNPMVFINPKIITFSDDFSVY----QEGCLSIPDYRADV 104
A QI + R++ + + D K+ + I Y + + V
Sbjct: 63 APQINISKRMIAVLIPDDGSGKSYDYMLVNPKIVSHSVQEAYLPTGEGCLSVDDNVAGLV 122
Query: 105 KRSAFITVRYMDCNAQHQIIYADGLLATCLQHELDHLNGILFIDHLSR 152
R IT++ D + G A QHE+DHLNG++F DH+ +
Sbjct: 123 HRHNRITIKAKDIEGNDIQLRLKGYPAIVFQHEIDHLNGVMFYDHIDK 170