PSIBLAST alignment of GI: 254780297 and protein with PDB id: 1v3y
>gi|58176979|pdb|1V3Y|A Chain A, The Crystal Structure Of Peptide Deformylase From Thermus Thermophilus Hb8 Length = 192
>gi|58176980|pdb|1V3Y|B Chain B, The Crystal Structure Of Peptide Deformylase From Thermus Thermophilus Hb8 Length = 192
Score = 123 bits (309), Expect = 8e-27, Method: Composition-based stats.
Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 23/189 (12%)
Query: 2 VKKPLVIFPDPILRRVSRPIEKINSDIMNLIDNMLEVMYSTDGIGLAAVQIGVLYRLVVI 61
+ P+ ++ DP+LRR +RP+E S I L ++MLE M+ G+GLAA QIG+ RL V
Sbjct: 1 MVYPIRLYGDPVLRRKARPVEDF-SGIKRLAEDMLETMFEAKGVGLAAPQIGLSQRLFVA 59
Query: 62 DLQDHAHRKNP-----------MVFINPKIITFSDDFSVYQEGCLSIPDYRADVKRSAFI 110
V NP I + Y +V R+ I
Sbjct: 60 VEYADEPEGEEERPLRELVRRVYVVANPVITYREGLVEGTEGXLSLPGLYSEEVPRAERI 119
Query: 111 TVRYMDCNAQHQIIYADGLLATCLQHELDHLNGILFIDHLSRLKRD-----------MIT 159
V Y D + +++ +G +A QHE+DHL+GILF + L + KR+
Sbjct: 120 RVEYQDEEGRGRVLELEGYMARVFQHEIDHLDGILFFERLPKPKREAFLEANRAELVRFQ 179
Query: 160 KKMSKLVQL 168
K+ L++
Sbjct: 180 KEARALLKE 188