PSIBLAST alignment of GI: 254780297 and protein with PDB id: 1v3y

>gi|58176979|pdb|1V3Y|A Chain A, The Crystal Structure Of Peptide Deformylase From Thermus Thermophilus Hb8 Length = 192
>gi|58176980|pdb|1V3Y|B Chain B, The Crystal Structure Of Peptide Deformylase From Thermus Thermophilus Hb8 Length = 192
 Score =  123 bits (309), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 23/189 (12%)

Query: 2   VKKPLVIFPDPILRRVSRPIEKINSDIMNLIDNMLEVMYSTDGIGLAAVQIGVLYRLVVI 61
           +  P+ ++ DP+LRR +RP+E   S I  L ++MLE M+   G+GLAA QIG+  RL V 
Sbjct: 1   MVYPIRLYGDPVLRRKARPVEDF-SGIKRLAEDMLETMFEAKGVGLAAPQIGLSQRLFVA 59

Query: 62  DLQDHAHRKNP-----------MVFINPKIITFSDDFSVYQEGCLSIPDYRADVKRSAFI 110
                                  V  NP I          +        Y  +V R+  I
Sbjct: 60  VEYADEPEGEEERPLRELVRRVYVVANPVITYREGLVEGTEGXLSLPGLYSEEVPRAERI 119

Query: 111 TVRYMDCNAQHQIIYADGLLATCLQHELDHLNGILFIDHLSRLKRD-----------MIT 159
            V Y D   + +++  +G +A   QHE+DHL+GILF + L + KR+              
Sbjct: 120 RVEYQDEEGRGRVLELEGYMARVFQHEIDHLDGILFFERLPKPKREAFLEANRAELVRFQ 179

Query: 160 KKMSKLVQL 168
           K+   L++ 
Sbjct: 180 KEARALLKE 188