RPSBLAST alignment of GI: 254780297 and SCOP domain: d1lm4a_

Alignment

 Score =  109 bits (272), Expect = 2e-25
 Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 17/172 (9%)

Query: 1   MVKKPLVIFPDPILRRVSRPIE-KINSDIMNLIDNMLEVMYST------------DGIGL 47
           +  K ++    P LR+ +  +E  +  +    +  M E + ++             G+GL
Sbjct: 13  LTMKDIIRDGHPTLRQKAAELELPLTKEEKETLIAMREFLVNSQDEEIAKRYGLRSGVGL 72

Query: 48  AAVQIGVLYRLVVIDL-QDHAHRKNPMVFINPKIITFSDDFSVY--QEGCLSIPDYRADV 104
           AA QI +  R++ + +  D + +    + +NPKI++ S   +     EGCLS+ D  A +
Sbjct: 73  AAPQINISKRMIAVLIPDDGSGKSYDYMLVNPKIVSHSVQEAYLPTGEGCLSVDDNVAGL 132

Query: 105 KRSAF-ITVRYMDCNAQHQIIYADGLLATCLQHELDHLNGILFIDHLSRLKR 155
                 IT++  D       +   G  A   QHE+DHLNG++F DH+ +   
Sbjct: 133 VHRHNRITIKAKDIEGNDIQLRLKGYPAIVFQHEIDHLNGVMFYDHIDKNHP 184

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Peptide deformylase
superfamily: Peptide deformylase
family: Peptide deformylase
domain: Peptide deformylase
species: Staphylococcus aureus [TaxId: 1280]