RPSBLAST alignment of GI: 254780297 and SCOP domain: d1lm6a_

Alignment

 Score =  110 bits (275), Expect = 7e-26
 Identities = 41/186 (22%), Positives = 72/186 (38%), Gaps = 24/186 (12%)

Query: 1   MVKKPLVIFPDPILRRVSRPIEKINSDIMNLIDN-------------MLEVMYSTDGIGL 47
           +    ++   +P LR V+  +    SD   ++               M E M    G+GL
Sbjct: 14  IDMNDIIREGNPTLRTVAEEVTFPLSDQEIILGEKMMQFLKHSQDPVMAEKMGLRGGVGL 73

Query: 48  AAVQIGVLYRLVVIDLQDHAHRKNPMVFINPKIITFSDDFSV----------YQEGCLSI 97
           AA Q+ +  R++ + + +                   +   V            EGCLS+
Sbjct: 74  AAPQLDISKRIIAVLVPNIVEEGETPQEAYDLEAIMYNPKIVSHSVQDAALGEGEGCLSV 133

Query: 98  P-DYRADVKRSAFITVRYMDCNAQHQIIYADGLLATCLQHELDHLNGILFIDHLSRLKRD 156
             +    V R A +TV Y D + +   I   G  +  +QHE+DH+NGI+F D ++     
Sbjct: 134 DRNVPGYVVRHARVTVDYFDKDGEKHRIKLKGYNSIVVQHEIDHINGIMFYDRINEKDPF 193

Query: 157 MITKKM 162
            +   +
Sbjct: 194 AVKDGL 199

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Peptide deformylase
superfamily: Peptide deformylase
family: Peptide deformylase
domain: Peptide deformylase
species: Streptococcus pneumoniae [TaxId: 1313]