HHsearch alignment for GI: 254780298 and conserved domain: COG1742
>COG1742 Uncharacterized conserved protein [Function unknown].
Probab=96.81 E-value=0.009 Score=31.22 Aligned_cols=101 Identities=9% Similarity=0.105 Sum_probs=76.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-HHHHHHHHHHHH
Q ss_conf 9899999999999999999995302222212112234566667999999999999999999999703-389999999999
Q gi|254780298|r 1 MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYIMVVAHFS-VRIAQTVVTSAI 79 (118)
Q Consensus 1 M~wl~l~~~i~~~~~g~i~lK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~aL~~~~-ls~ayp~~s~~~ 79 (118)
T Consensus 3 ~~~~~f~lAalaEI~Gcyl~WlWLR~g-------------k-s~~~~l~g~~sL~lf~~llT~~~~~a~GRvYAAYGGvy 68 (109)
T COG1742 3 RSYLLFVLAALAEIGGCYLVWLWLRLG-------------K-SALWLLPGALSLALFGWLLTLQPAAAFGRVYAAYGGVY 68 (109)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCC-------------C-CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHH
T ss_conf 878999999999973167879999738-------------7-32767778999999999997178022003788736367
Q ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999993899998999999999999999987
Q gi|254780298|r 80 IIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISF 115 (118)
Q Consensus 80 ~v~~~~~~~~~f~E~~~~~~~~Gi~lIi~Gvili~~ 115 (118)
T Consensus 69 I~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~ 104 (109)
T COG1742 69 IAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILF 104 (109)
T ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCEEEEEE
T ss_conf 799999999971767748875257999836213685