HHsearch alignment for GI: 254780298 and conserved domain: COG2962
>COG2962 RarD Predicted permeases [General function prediction only].
Probab=96.43 E-value=0.039 Score=28.13 Aligned_cols=58 Identities=12% Similarity=0.227 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHH---HHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999---97033899999999999999999999938999989999999999999999
Q gi|254780298|r 52 YAISFFTYIMVV---AHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLI 113 (118)
Q Consensus 52 ~~~s~~~~~~aL---~~~~ls~ayp~~s~~~~v~~~~~~~~~f~E~~~~~~~~Gi~lIi~Gvili 113 (118)
T Consensus 82 i~~nW~lfiWAvn~g~~leaSLGY~InPL----~~VllG~lflkErls~~Q~iAV~lA~~GV~~~ 142 (293)
T COG2962 82 IGLNWWLFIWAVNNGHVLEASLGYFINPL----VNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQ 142 (293)
T ss_pred HHHHHHHHHEECCCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf 99777875053179853688767999899----99999999997144688999999999999999