HHsearch alignment for GI: 254780298 and conserved domain: PRK11431
>PRK11431 quaternary ammonium compound-resistance protein SugE; Provisional.
Probab=99.95 E-value=1.4e-27 Score=152.13 Aligned_cols=104 Identities=19% Similarity=0.162 Sum_probs=101.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
Q ss_conf 98999999999999999999953022222121122345666679999999999999999999997033899999999999
Q gi|254780298|r 1 MKWIALLANVALGVLSSVFIKMSIIPPEAPPHFADSTRFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAII 80 (118)
Q Consensus 1 M~wl~l~~~i~~~~~g~i~lK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~aL~~~~ls~ayp~~s~~~~ 80 (118)
T Consensus 1 MaW~~L~~Ai~~Ev~~t~~lk~s~-------------gft~~~p~i~~~~~~~~sf~~Ls~alk~lpvg~aYAvWsGiG~ 67 (105)
T PRK11431 1 MSWIILVIAGLLEVVWAVGLKYTH-------------GFSRLTPSIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGA 67 (105)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHH-------------CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 966999999999999999999886-------------7774599999999999999999999957987109999997999
Q ss_pred HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 9999999999389999899999999999999998724
Q gi|254780298|r 81 IIATCLSSLIWDEPFYWTTAIGIMFVMIGITLISFHT 117 (118)
Q Consensus 81 v~~~~~~~~~f~E~~~~~~~~Gi~lIi~Gvili~~~t 117 (118)
T Consensus 68 vg~~~iG~~~f~e~~~~~~i~~i~lIi~GVv~Lkl~S 104 (105)
T PRK11431 68 VGAAITGIVLLGESASPARLLSLALIVAGIIGLKLST 104 (105)
T ss_pred HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEECCC
T ss_conf 9999999999179898999999999999998331146