HHsearch alignment for GI: 254780298 and conserved domain: TIGR00776

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein; InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane.
Probab=95.61  E-value=0.1  Score=26.10  Aligned_cols=80  Identities=13%  Similarity=0.149  Sum_probs=65.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCC-------CHHHHHHHHHHHHH
Q ss_conf             45666679999999999999999999997033899999999999999999999938999-------98999999999999
Q gi|254780298|r   37 TRFSDGKLFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPF-------YWTTAIGIMFVMIG  109 (118)
Q Consensus        37 ~~~~~~~~~~~~~~~~~~s~~~~~~aL~~~~ls~ayp~~s~~~~v~~~~~~~~~f~E~~-------~~~~~~Gi~lIi~G  109 (118)
T Consensus        62 F~l~~~~~gl~sG~~WalGQ~~q~~~~~~~GvS~tmPistG~QLv~~sL~gvivfgeW~~~~~~~~GRmt~lAl~liiiG  141 (336)
T TIGR00776        62 FSLTIFLVGLISGAFWALGQINQFKSMRYIGVSKTMPISTGLQLVGGSLFGVIVFGEWSTSIQILLGRMTLLALILIIIG  141 (336)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEHHHHHHHHHHHHHH
T ss_conf             12477888999999999875458777764020220145664899987877530122447631013054999999999999


Q ss_pred             HHHHHHH
Q ss_conf             9999872
Q gi|254780298|r  110 ITLISFH  116 (118)
Q Consensus       110 vili~~~  116 (118)
T Consensus       142 v~lts~~  148 (336)
T TIGR00776       142 VYLTSIS  148 (336)
T ss_pred             HHHHHHH
T ss_conf             9997302