HHsearch alignment for GI: 254780298 and conserved domain: TIGR03340
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.77 E-value=1.9e-07 Score=54.01 Aligned_cols=69 Identities=16% Similarity=0.316 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999999997033899999999999999999999938999989999999999999999
Q gi|254780298|r 44 LFWLGFFFYAISFFTYIMVVAHFSVRIAQTVVTSAIIIIATCLSSLIWDEPFYWTTAIGIMFVMIGITLI 113 (118)
Q Consensus 44 ~~~~~~~~~~~s~~~~~~aL~~~~ls~ayp~~s~~~~v~~~~~~~~~f~E~~~~~~~~Gi~lIi~Gvili 113 (118)
T Consensus 213 ~~~~~G~~s~~sY~lvl~A~~~~pva~VaalRe-tSIlfa~l~g~~~lkE~~~~~Rl~~~~li~~Gvvll 281 (281)
T TIGR03340 213 SATLGGLMIGGAYALVLWAMTRLPVATVVALRN-TSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVVL 281 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH-HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 999999999999999999981084265676998-899999999999977965098999999999979969