HHsearch alignment for GI: 254780299 and conserved domain: PRK12341
>PRK12341 putative acyl-CoA dehydrogenase; Provisional.
Probab=100.00 E-value=0 Score=459.38 Aligned_cols=327 Identities=19% Similarity=0.210 Sum_probs=277.7
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH-HCCHHHHHHHHHHHCC-CC
Q ss_conf 999999967962033776666444763799999999983014453122135677899998-5087889873012001-00
Q gi|254780299|r 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVAL-MTTPRVHKDWAPKIFS-RE 182 (562)
Q Consensus 105 ~l~~~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~cp~~mt~~a~~~L-~~~~e~~~~~lp~l~s-~~ 182 (562)
T Consensus 41 ~~~~~l~e~Gl~~l~vPee~GG~G--~~~~~~~~v~eelg~~~~~~~~-~~~~~~~~~i~~~gs~eq~~~~l~~~l~~G~ 117 (383)
T PRK12341 41 EFMRALADNGISMLGVPEEFGGIP--ADYVTQMLALMEVSKCGAPAFL-ITNGQCIHSMRRFGSAEQLRKTAESTLETGD 117 (383)
T ss_pred HHHHHHHHCCCCCCCCCHHHCCCC--CCHHHHHHHHHHHHHHCCCCCC-CCHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
T ss_conf 999999977888879985458999--8899999999999873677654-3179999999997899999998568872787
Q ss_pred CCHHHCCCCCCCCCEEEEECCCCCCCCCHHHCCEEEEECCCCEEEECCEEEEEE-CCCCCEEEEEEECCC------CCEE
Q ss_conf 054426600155212355445888887866543027864896689845146863-421157999704699------6179
Q gi|254780299|r 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEG------RVGC 255 (562)
Q Consensus 183 ~~~~~~~~~~k~g~~~~~~lTEp~~GSDv~~~~T~A~~~gdg~y~LnG~Kwf~s-a~~ad~~lVlArt~~------Gls~ 255 (562)
T Consensus 118 -------------~~~~~a~tEp~~Gsd~~~~~tta~~~~~-~~~lnG~K~~it~a~~Ad~~~v~ar~~~~~~~~~gis~ 183 (383)
T PRK12341 118 -------------PAYALALTEPGAGSDNNSATTTYTRKNG-KVYINGQKTFITGAKEYPYMLVLARDPQPKDPKKAFTL 183 (383)
T ss_pred -------------EEEEEEECCCCCCCCHHHCEEEEEEECC-EEEEECEECCCCCCCCCCEEEEEECCCCCCCCCCEEEE
T ss_conf -------------5799982488877871226257886399-99995635474555568789999535888887654899
Q ss_pred EEEECCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCEEE---EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99877589884034788630475545657727999869075---300777657999999730133357999999999999
Q gi|254780299|r 256 FLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSL 332 (562)
Q Consensus 256 FlVp~~~pgg~~n~v~i~r~~~klG~r~~~t~ei~f~~~~~---~llG~~g~G~~~i~~~l~~~Rl~~a~~~~G~ar~al 332 (562)
T Consensus 184 flV~~~~pG-----v~v~~-~~~~g~~~~~~~~v~f~dv~Vp~~~~lg~~g~g~~~~~~~l~~~rl~~aa~~~G~a~~al 257 (383)
T PRK12341 184 WWVDSSKPG-----IKINP-LHKIGWHMLSTCEVYLDNVEVEESDLVGEEGMGFLNVMYNFEMERLINAARSTGFAECAF 257 (383)
T ss_pred EEEECCCCC-----EEEEC-CCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 998569996-----48704-645688765202342354223611146766728999999776889999998850557667
Q ss_pred HHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999984046222423538888999999999999999999999988720111036777655679999999999999999
Q gi|254780299|r 333 AEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVI 412 (562)
Q Consensus 333 ~~A~~yA~~R~~fG~~L~~~p~v~~~LAdm~~~~eaa~~l~~~~A~~~D~~~~~~~~~a~arl~t~iaK~~~~e~a~~v~ 412 (562)
T Consensus 258 ~~a~~ya~~R~qfG~pi~~~Q~vq~~lad~~~~~e~ar~l~~~aa~~~d~~~~~~-------~~aa~aK~~a~e~a~~v~ 330 (383)
T PRK12341 258 EDAARYANQRIAFGKPIGHNQMIQEKLALMAIKIENMRNMVLKVAWQADNGQSLR-------TSAALAKLYCARTAMEVI 330 (383)
T ss_pred HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH-------HHHHHHHHHHHHHHHHHH
T ss_conf 7653457888861985003899999999999999999999999999986899953-------799999999999999999
Q ss_pred HHHHHHHCCCCCCCCCHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHCCC
Q ss_conf 5699885213000455188985001223220462227899999983126
Q gi|254780299|r 413 AEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG 461 (562)
Q Consensus 413 ~~Aiqi~GG~Gy~ee~~leRl~RDA~v~~I~EGt~~I~aldv~r~l~r~ 461 (562)
T Consensus 331 ~~a~qi~Gg~G~~~e~~~~r~~Rdar~~~I~~Gt~ei~~~~ia~~vl~~ 379 (383)
T PRK12341 331 DDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMIYVAGRQILKD 379 (383)
T ss_pred HHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 9999963850104554999999984161751778999999999999998