>cd01153 ACAD_fadE5 Putative acyl-CoA dehydrogenase (ACAD). Mitochondrial acyl-CoA dehydrogenases (ACAD) catalyze the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. The ACD family includes the eukaryotic beta-oxidation, as well as amino acid catabolism enzymes. These enzymes share high sequence similarity, but differ in their substrate specificities. The mitochondrial ACD's are generally homotetramers and have an active site glutamate at a conserved position.

Probab=100.00 E-value=0 Score=526.75 Aligned_cols=364 Identities=23% Similarity=0.368 Sum_probs=311.6 Q ss_pred CCCEECCCCCCCCCCC--EEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHH Q ss_conf 6984620179985213--65668899999999996796203377666644476379999999998301445312213567 Q gi|254780299|r 80 NTPQLHAYGPGGERWD--KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT 157 (562) Q Consensus 80 ~~P~l~~~d~~G~r~d--~v~~~p~~~~l~~~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~cp~~mt 157 (562) T Consensus 13 i~P~~~e~dr~~~~~~~~~~~~p~~~~e~~~~~~e~Gl~g~~vPee~GG~G~~--~~~~~~~~eel~r~~~~~~~~~~~~ 90 (407) T cd01153 13 LAPLNADGDREGPVFDDGRVVVPPPFKEALDAFAEAGWMALGVPEEYGGQGLP--ITVYSALAEIFSRGDAPLMYASGTQ 90 (407) T ss_pred CCCCCHHHHHCCCCCCCCCEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC--HHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 35772878635771579832678269999999997798888989000999968--9999999999984748899999999 Q ss_pred HHHHHHHH-CCHHHHHHHHHHHCCCCCCHHHCCCCCCCCCEEEEECCCCCCCCCHHHCCEEEEECCCCEEEECCEEEEEE Q ss_conf 78999985-08788987301200100054426600155212355445888887866543027864896689845146863 Q gi|254780299|r 158 SASMVALM-TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS 236 (562) Q Consensus 158 ~~a~~~L~-~~~e~~~~~lp~l~s~~~~~~~~~~~~k~g~~~~~~lTEp~~GSDv~~~~T~A~~~gdg~y~LnG~Kwf~s 236 (562) T Consensus 91 ~~~~~i~~~Gt~eqk~~~Lp~i~~G~~-------------~~a~a~TEp~~GSd~~~~~T~A~~~gdG~~vlnG~K~~it 157 (407) T cd01153 91 GAAATLLAHGTEAQREKWIPRLAEGEW-------------TGTMCLTEPDAGSDLGALRTKAVYQADGSWRINGVKRFIS 157 (407) T ss_pred HHHHHHHHHCCHHHHHHHHHHHHCCCH-------------HEEEEECCCCCCCCCCCCEEEEEECCCCEEEEEEEEEEEE T ss_conf 999999985999999998999968972-------------3498855897678845011255674897189961243352 Q ss_pred CCC-CC----EEEEEEECCC------CCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCEEEEEECCCCCH Q ss_conf 421-15----7999704699------617999877589884034788630475545657727999869075300777657 Q gi|254780299|r 237 SPM-SD----AFIMLAQVEG------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVS 305 (562) Q Consensus 237 a~~-ad----~~lVlArt~~------Gls~FlVp~~~pgg~~n~v~i~r~~~klG~r~~~t~ei~f~~~~~~llG~~g~G 305 (562) T Consensus 158 ~g~~a~~~~~~~~v~art~~~~~~~~g~s~flVp~~~~~~~~~G~~v~~~~~~~G~rg~~~~~l~f~dv~v~llG~~g~G 237 (407) T cd01153 158 AGEHDMSENIVHLVLARSEGAPPGVKGLSLFLVPKFLDDGERNGVTVARIEEKMGLHGSPTCELVFDNAKGELIGEEGMG 237 (407) T ss_pred CCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCEEECCCCCEECCCCCCCCC T ss_conf 13346635579999984589876766733676457567888797488301144477778840001356331233677754 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCC--------HHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 9999997301333579999999999999999998404622242353888--------89999999999999999999999 Q gi|254780299|r 306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPV--------MKRAIADIALDIAAATALSFRLA 377 (562) Q Consensus 306 ~~~i~~~l~~~Rl~~a~~~~G~ar~al~~A~~yA~~R~~fG~~L~~~p~--------v~~~LAdm~~~~eaa~~l~~~~A 377 (562) T Consensus 238 ~~~~~~~l~~~R~~~aa~~lG~a~~al~~a~~ya~~R~~fg~pi~~~q~v~~~~~~~~~~~la~~~~~~e~~r~~~~~~a 317 (407) T cd01153 238 LAQMFAMMNGARLGVGTQGTGLAEAAYLNALAYAKERKQGGDLIKAAPAVTIIHHPDVRRSLMTQKAYAEGSRALDLYTA 317 (407) T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 77776333079999999999999999999999987777437611211320465149999999999999999999999999 Q ss_pred HHHHCCCCCHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHCCCCHHHH Q ss_conf 887201110367-------7765567999999999999999956998852130004551889850012232204622278 Q gi|254780299|r 378 NSFDEAKSRSEE-------AAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAM 450 (562) Q Consensus 378 ~~~D~~~~~~~~-------~a~arl~t~iaK~~~~e~a~~v~~~Aiqi~GG~Gy~ee~~leRl~RDA~v~~I~EGt~~I~ 450 (562) T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~a~~~~s~aK~~ase~a~~v~~~a~ql~GG~Gy~~e~~ler~~RDar~~~I~eGt~eIq 397 (407) T cd01153 318 TVQDLAERKATEGEDRKALSALADLLTPVVKGFGSEAALEAVSDAIQVHGGSGYTREYPIEQYYRDARITTIYEGTTGIQ 397 (407) T ss_pred HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHH T ss_conf 99875456655277888777767778899999999999999999999731276711689999999876357226699999 Q ss_pred HHHHH-HHH Q ss_conf 99999-983 Q gi|254780299|r 451 VLDVL-NLL 458 (562) Q Consensus 451 aldv~-r~l 458 (562) T Consensus 398 ~~~iigr~~ 406 (407) T cd01153 398 ALDLIGRKI 406 (407) T ss_pred HHHHHHHCC T ss_conf 988798617

HHsearch alignment for GI: 254780299 and conserved domain: cd01153