>cd01155 ACAD_FadE2 FadE2-like Acyl-CoA dehydrogenase (ACAD). Acyl-CoA dehydrogenases (ACAD) catalyze the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. The ACAD family includes the eukaryotic beta-oxidation, as well as amino acid catabolism enzymes. These enzymes share high sequence similarity, but differ in their substrate specificities. ACAD's are generally homotetramers and have an active site glutamate at a conserved position.

Probab=100.00 E-value=0 Score=517.59 Aligned_cols=353 Identities=17% Similarity=0.159 Sum_probs=294.0 Q ss_pred CCEECCCCCCCC-CCCE-EECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC---CCCCCCCHH Q ss_conf 984620179985-2136-56688999999999967962033776666444763799999999983014---453122135 Q gi|254780299|r 81 TPQLHAYGPGGE-RWDK-VEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQL---EAGHLMSPS 155 (562) Q Consensus 81 ~P~l~~~d~~G~-r~d~-v~~~p~~~~l~~~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~---~~g~~cp~~ 155 (562) T Consensus 19 ~P~~~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~g~~~PeeyGG~G~~--~~~~~~~~Eel~r~~~~~~~~~~~~~ 96 (394) T cd01155 19 YPAEQEFLEYYAEGGDRWWTPPPIIEKLKAKAKAEGLWNLFLPEVSGLSGLT--NLEYAYLAEETGRSFFAPEVFNCQAP 96 (394) T ss_pred CCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHCCCCCC--HHHHHHHHHHHHHHCCCCCCCHHHHH T ss_conf 4865888866511555311361479999999996797788998634899989--99999999999762634210010324 Q ss_pred HHHHHHHHH--HCCHHHHHHHHHHHCCCCCCHHHCCCCCCCCCEEEEECCCCC-CCCCHHHCCEEEEECCCCEEEECCEE Q ss_conf 677899998--508788987301200100054426600155212355445888-88786654302786489668984514 Q gi|254780299|r 156 VTSASMVAL--MTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKR-GGTDIAAITSQGQKISDGIYCLSGHK 232 (562) Q Consensus 156 mt~~a~~~L--~~~~e~~~~~lp~l~s~~~~~~~~~~~~k~g~~~~~~lTEp~-~GSDv~~~~T~A~~~gdg~y~LnG~K 232 (562) T Consensus 97 ~~-g~~~~l~~~Gteeqk~~~Lp~l~~Ge~-------------~~~~a~TEP~~agsD~~~~~T~A~~dgd~-~vlnG~K 161 (394) T cd01155 97 DT-GNMEVLHRYGSEEQKKQWLEPLLDGKI-------------RSAFAMTEPDVASSDATNIECSIERDGDD-YVINGRK 161 (394) T ss_pred HH-HHHHHHHHHCCHHHHHHHHHHHHCCCH-------------HEEEEEECCCCCCCCHHHCEEEEEECCCE-EEEEEEE T ss_conf 55-159999986999999998899847872-------------13888636987889678877898863998-9995379 Q ss_pred EEEECC---CCCEEEEEEECCC-------CCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCC--EEEEEECCEE---EE Q ss_conf 686342---1157999704699-------6179998775898840347886304755456577--2799986907---53 Q gi|254780299|r 233 WFLSSP---MSDAFIMLAQVEG-------RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA--TVELEFSNTF---GF 297 (562) Q Consensus 233 wf~sa~---~ad~~lVlArt~~-------Gls~FlVp~~~pgg~~n~v~i~r~~~klG~r~~~--t~ei~f~~~~---~~ 297 (562) T Consensus 162 ~~is~a~~a~a~~~~v~art~~~~~~~~~~~s~flV~~~~pG-----v~~~~~~~~~G~~~~~~g~~ev~fddv~VP~~~ 236 (394) T cd01155 162 WWSSGAGDPRCKIAIVMGRTDPDGAPRHRQQSMILVPMDTPG-----VTIIRPLSVFGYDDAPHGHAEITFDNVRVPASN 236 (394) T ss_pred EECCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEECCCCC-----EEECCCCCEECCCCCCCCCCEEEEEEECCCCEE T ss_conf 711577566654799999606887777662689999726897-----462355421033478987423653123025210 Q ss_pred EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 00777657999999730133357999999999999999999840462224235388889999999999999999999999 Q gi|254780299|r 298 LLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLA 377 (562) Q Consensus 298 llG~~g~G~~~i~~~l~~~Rl~~a~~~~G~ar~al~~A~~yA~~R~~fG~~L~~~p~v~~~LAdm~~~~eaa~~l~~~~A 377 (562) T Consensus 237 llG~~g~G~~~~~~~l~~~R~~~aa~~vG~a~~al~~a~~ya~~R~~fG~pi~~~q~v~~~ladm~~~ieaar~l~~~aa 316 (394) T cd01155 237 LILGEGRGFEIAQGRLGPGRIHHCMRLIGAAERALELMCQRAVSREAFGKKLAQHGVVAHWIAKSRIEIEQARLLVLKAA 316 (394) T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 13778861999998878999999999855048899888898761111797766489999999999999999999999999 Q ss_pred HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHCCCCHHHHHHHHHHH Q ss_conf 88720111036777655679999999999999999569988521300045518898500122322046222789999998 Q gi|254780299|r 378 NSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNL 457 (562) Q Consensus 378 ~~~D~~~~~~~~~a~arl~t~iaK~~~~e~a~~v~~~Aiqi~GG~Gy~ee~~leRl~RDA~v~~I~EGt~~I~aldv~r~ 457 (562) T Consensus 317 ~~~D~~~~~~-----~~~~~a~aK~~ase~a~~va~~aiqi~Gg~G~~~e~~~~r~~Rdar~~~I~eGt~EI~r~iIar~ 391 (394) T cd01155 317 HMIDTVGNKA-----ARKEIAMIKVAAPRMALKIIDRAIQVHGAAGVSQDTPLANMYAWARTLRIADGPDEVHLRSIARM 391 (394) T ss_pred HHHHCCCCCH-----HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH T ss_conf 9984799831-----69999999999999999999999996397300654699999998752774234999999999999 Q ss_pred HCC Q ss_conf 312 Q gi|254780299|r 458 LEK 460 (562) Q Consensus 458 l~r 460 (562) T Consensus 392 ~L~ 394 (394) T cd01155 392 ELK 394 (394) T ss_pred HHC T ss_conf 859

HHsearch alignment for GI: 254780299 and conserved domain: cd01155