HHsearch results for GI: 254780299 and protein with PDBid: 1buc_A
>1buc_A Butyryl-COA dehydrogenase; acyl-COA dehydrogenase short-chain acyl-COA dehydrogenase, flavoprotein, oxidoreductase; HET: CAA FAD; 2.50A {Megasphaera elsdenii} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=0 Score=393.58 Aligned_cols=345 Identities=21% Similarity=0.296 Sum_probs=286.0
Q ss_pred CCEECCCCCCCCCCCEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH-HHHHHCCCC--CCCCCCHHHH
Q ss_conf 9846201799852136566889999999999679620337766664447637999999-999830144--5312213567
Q gi|254780299|r 81 TPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAA-RLYLMAQLE--AGHLMSPSVT 157 (562)
Q Consensus 81 ~P~l~~~d~~G~r~d~v~~~p~~~~l~~~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~a-~~~l~~~~~--~g~~cp~~mt 157 (562)
.|....+|+.| .+++ ++++...+.|++++.++.++|+.+.........+ ...-.+... ....+... .
T Consensus 25 ~p~~~e~d~~~------~~p~---~~~~~l~~~Gl~~l~vP~e~GG~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 94 (383)
T 1buc_A 25 APTVTERDHKG------IYDK---ELIDELLSLGITGAYFEEKYGGSGDDGGDVLSYILAVEELAKYDAGVAITLSAT-V 94 (383)
T ss_dssp TTTHHHHHHHT------CCCH---HHHHHHHTTSGGGTTSCGGGTCGGGGTCCHHHHHHHHHHHHHHCHHHHHHHHHH-H
T ss_pred CCHHHHHHHCC------CCCH---HHHHHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCH-H
T ss_conf 30089998629------9999---999999977997578996678999984049999999999864046643333201-4
Q ss_pred HHHHHHHH--CCHHHHHHHHHHHCCCCCCHHHCCCCCCCCCEEEEECCCCCCCCCHHHCCEEEEECCCCEEEECCEEEEE
Q ss_conf 78999985--0878898730120010005442660015521235544588888786654302786489668984514686
Q gi|254780299|r 158 SASMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFL 235 (562)
Q Consensus 158 ~~a~~~L~--~~~e~~~~~lp~l~s~~~~~~~~~~~~k~g~~~~~~lTEp~~GSDv~~~~T~A~~~gdg~y~LnG~Kwf~ 235 (562)
......|. ++++++..|++.+.++.. ..+++.+|+.+|||...+.|+|++++||+|+|||+|+|+
T Consensus 95 ~~~~~~l~~~~~~~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~~~~~~t~a~~~~~g~~~l~G~k~~~ 161 (383)
T 1buc_A 95 SLCANPIWQFGTEAQKEKFLVPLVEGTK-------------LGAFGLTEPNAGTDASGQQTIATKNDDGTYTLNGSKIFI 161 (383)
T ss_dssp HHTHHHHHHHCCHHHHHHTHHHHHHTSS-------------CEEEECCBTTBSSCGGGCCCEEEECTTSCEEEEEEEEEE
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHCCCE-------------ECCCCCCCCCCCCCCHHCEEEEEECCCCEEEEEEEEEEE
T ss_conf 6789999983799999999778636862-------------002344433556651223479998589869995048877
Q ss_pred E-CCCCCEEEEEEECCC-----CCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCEEE---EEECCCCCHH
Q ss_conf 3-421157999704699-----617999877589884034788630475545657727999869075---3007776579
Q gi|254780299|r 236 S-SPMSDAFIMLAQVEG-----RVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVST 306 (562)
Q Consensus 236 s-a~~ad~~lVlArt~~-----Gls~FlVp~~~pgg~~n~v~i~r~~~klG~r~~~t~ei~f~~~~~---~llG~~g~G~ 306 (562)
| ++.+|+++|.++++. |+++|+||++.|| +++.+.++++|+++++++++.|+||.+ ++||++|+|+
T Consensus 162 s~~~~a~~~~v~~~~~~~~~~~g~~~~lv~~~~~g-----v~i~~~~~~~G~r~t~s~~v~~~dv~Vp~~~ilg~~g~g~ 236 (383)
T 1buc_A 162 TNGGAADIYIVFAMTDKSKGNHGITAFILEDGTPG-----FTYGKKEDKMGIHTSQTMELVFQDVKVPAENMLGEEGKGF 236 (383)
T ss_dssp ETTTTCSEEEEEEESCSSSSTTSEEEEEEETTCTT-----EEEEEECCCSSCTTSCEEEEEEEEEEECGGGEESCTTBHH
T ss_pred CCCCCCCEEEEEEECCCCCCCCEEEEEEEECCCCC-----EEEECCCCCCCCCCCCEEEEEEEEEEECHHHHCCCCCCHH
T ss_conf 77776878999964178888760599999889894-----6960565665677786169998217986999079888559
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 99999730133357999999999999999999840462224235388889999999999999999999999887201110
Q gi|254780299|r 307 GPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR 386 (562)
Q Consensus 307 ~~i~~~l~~~Rl~~a~~~~G~ar~al~~A~~yA~~R~~fG~~L~~~p~v~~~LAdm~~~~eaa~~l~~~~A~~~D~~~~~ 386 (562)
+.++..++.+|+.+++.++|+++++++.+++|+++|++||+||.++|.++++|+++.+.+++++.+++.++...|.+...
T Consensus 237 ~~~~~~~~~~rl~~~a~~~G~~~~al~~~~~~~~~R~~~g~pi~~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (383)
T 1buc_A 237 KIAMMTLDGGRIGVAAQALGIAEAALADAVEYSKQRVQFGKPLCKFQSISFKLADMKMQIEAARNLVYKAACKKQEGKPF 316 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 99999899999999999999999999999999873421697556489999999999999998764699999999769962
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHCC
Q ss_conf 36777655679999999999999999569988521300045518898500122322046222789999998312
Q gi|254780299|r 387 SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 (562)
Q Consensus 387 ~~~~a~arl~t~iaK~~~~e~a~~v~~~Aiqi~GG~Gy~ee~~leRl~RDA~v~~I~EGt~~I~aldv~r~l~r 460 (562)
. ..++++|+++++.+.+++++++|++||.||++++|++|+|||+++.+|||||++||++.+.|.+.|
T Consensus 317 ~-------~~~~~aK~~a~~~~~~v~~~a~~~~Gg~g~~~~~pl~r~~RDa~~~~i~~G~~~v~~~~i~~~ll~ 383 (383)
T 1buc_A 317 T-------VDAAIAKRVASDVAMRVTTEAVQIFGGYGYSEEYPVARHMRDAKITQIYEGTNEVQLMVTGGALLR 383 (383)
T ss_dssp H-------HHHHHHHHHHHHHHHHHHHHHHHHHGGGGGSTTSSHHHHHHHHGGGGTTTSCHHHHHHHHHHHHTC
T ss_pred H-------HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHC
T ss_conf 7-------899999999999999999999997073132466689999976052227438899999999999749