HHsearch results for GI: 254780299 and protein with PDBid: 1ivh_A

>1ivh_A Isovaleryl-COA dehydrogenase; oxidoreductase, acyl-COA dehydrogenase, flavoprotein, isovaleric acidemia; HET: FAD COS; 2.60A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=100.00  E-value=0  Score=450.24  Aligned_cols=347  Identities=18%  Similarity=0.247  Sum_probs=294.6

Q ss_pred             CCCEECCCCCCCCCCCEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHH--H
Q ss_conf             69846201799852136566889999999999679620337766664447637999999999830144531221356--7
Q gi|254780299|r   80 NTPQLHAYGPGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSV--T  157 (562)
Q Consensus        80 ~~P~l~~~d~~G~r~d~v~~~p~~~~l~~~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~cp~~m--t  157 (562)
                      ..|....+|+.++       -|..+++++.+.+.||.++.++.++++.+...  ...+....-++..+....++..+  .
T Consensus        32 ~~p~~~~~d~~~~-------~~~~~e~~~~l~e~G~~~~~vP~e~GG~g~~~--~~~~~~~e~l~~~~~~~~~~~~~~~~  102 (394)
T 1ivh_A           32 LAPKAQEIDRSNE-------FKNLREFWKQLGNLGVLGITAPVQYGGSGLGY--LEHVLVMEEISRASGAVGLSYGAHSN  102 (394)
T ss_dssp             TTTTHHHHHHHTC-------CTTHHHHHHHHHHHTCTTTTSCGGGTCCCCCH--HHHHHHHHHHHHHCHHHHHHHHHHHT
T ss_pred             CCHHHHHHHHHCC-------CCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCH--HHHHHHHHHHHHCCCCCCHHHHCCHH
T ss_conf             8555899986089-------98479999999977987778996678999999--99999999998601454201212134


Q ss_pred             HHHHHHHH-CCHHHHHHHHHHHCCCCCCHHHCCCCCCCCCEEEEECCCCCCCCCHHHCCEEEEECCCCEEEECCEEEEEE
Q ss_conf             78999985-08788987301200100054426600155212355445888887866543027864896689845146863
Q gi|254780299|r  158 SASMVALM-TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS  236 (562)
Q Consensus       158 ~~a~~~L~-~~~e~~~~~lp~l~s~~~~~~~~~~~~k~g~~~~~~lTEp~~GSDv~~~~T~A~~~gdg~y~LnG~Kwf~s  236 (562)
                      .+...++. ++++++.+|+|++.+++.             +.++++|||++|||+.+++|+|++++|| |+|||+|||+|
T Consensus       103 ~~~~~l~~~~~~~~~~~~l~~~~~G~~-------------~~~~a~tEp~~gsd~~~~~t~a~~~g~g-~~l~G~K~~vs  168 (394)
T 1ivh_A          103 LCINQLVRNGNEAQKEKYLPKLISGEY-------------IGALAMSEPNAGSDVVSMKLKAEKKGNH-YILNGNKFWIT  168 (394)
T ss_dssp             TTHHHHHHHCCHHHHHHHHHHHHHTSS-------------CEEEECCBTTBSSSGGGCCCEEEECSSE-EEEEEEEEEEE
T ss_pred             HHHHHHHHHCCHHHHHHCCCHHCCCCE-------------EEEEEECCCCCCCCCCCCEEEEEEECCE-EEEEEEEEEEC
T ss_conf             789999984887765420515407887-------------5400205898888876723799996999-99987999877


Q ss_pred             C-CCCCEEEEEEECC-------CCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCEEE---EEECCCCCH
Q ss_conf             4-2115799970469-------9617999877589884034788630475545657727999869075---300777657
Q gi|254780299|r  237 S-PMSDAFIMLAQVE-------GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVS  305 (562)
Q Consensus       237 a-~~ad~~lVlArt~-------~Gls~FlVp~~~pgg~~n~v~i~r~~~klG~r~~~t~ei~f~~~~~---~llG~~g~G  305 (562)
                      + +.+|+++|+|+++       +|+++|+||++.||     |++.+.++++|+|+++++.+.|++|++   ++||++|+|
T Consensus       169 ~~~~A~~~~~~a~~~~~~~~~~~g~s~~lVp~~~~g-----v~i~~~~~~~G~rg~~~~~v~fd~v~Vp~~~~lg~~~~g  243 (394)
T 1ivh_A          169 NGPDADVLIVYAKTDLAAVPASRGITAFIVEKGMPG-----FSTSKKLDKLGMRGSNTCELIFEDCKIPAANILGHENKG  243 (394)
T ss_dssp             TGGGCSEEEEEEESCTTCSSGGGGEEEEEEETTCTT-----EEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESCTTCH
T ss_pred             CCCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCC-----EEECCCCCCCCCCCCCEEEEEEECEEECHHHHCCCCCCH
T ss_conf             863344124432116666787784389999789996-----383687676668888647999936385699908887827


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             99999973013335799999999999999999984046222423538888999999999999999999999988720111
Q gi|254780299|r  306 TGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKS  385 (562)
Q Consensus       306 ~~~i~~~l~~~Rl~~a~~~~G~ar~al~~A~~yA~~R~~fG~~L~~~p~v~~~LAdm~~~~eaa~~l~~~~A~~~D~~~~  385 (562)
                      ++.++..++.+|+.+++.++|+++++++.+++|+++|+|||+||+++|.++++|++|.+.+++++++++++++.+|++..
T Consensus       244 ~~~~~~~~~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~~g~pi~~~q~v~~~la~~~~~~~a~~~l~~~~a~~~d~~~~  323 (394)
T 1ivh_A          244 VYVLMSGLDLERLVLAGGPLGLMQAVLDHTIPYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHC  323 (394)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             99999989999999999999999999999999997406518804001036677764567999999999999999976999


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHCCC
Q ss_conf             0367776556799999999999999995699885213000455188985001223220462227899999983126
Q gi|254780299|r  386 RSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKG  461 (562)
Q Consensus       386 ~~~~~a~arl~t~iaK~~~~e~a~~v~~~Aiqi~GG~Gy~ee~~leRl~RDA~v~~I~EGt~~I~aldv~r~l~r~  461 (562)
                      ...       .++++|+++++.+.+++++|||++||.||++|+|++|+|||+++++|+|||++||.+.+.|.+.++
T Consensus       324 ~~~-------~~~~~K~~~~~~~~~v~~~a~~~~Gg~G~~~~~~l~r~~RDar~~~i~~G~~ev~~~~i~r~~~~~  392 (394)
T 1ivh_A          324 TAK-------DCAGVILYSAECATQVALDGIQCFGGNGYINDFPMGRFLRDAKLYEIGAGTSEVRRLVIGRAFNAD  392 (394)
T ss_dssp             CHH-------HHHHHHHHHHHHHHHHHHHHHHHHGGGGGBTTSTHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHTC
T ss_pred             CHH-------HHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHH
T ss_conf             789-------999999999999999999999973507661566899999862121661578999999999998641