HHsearch results for GI: 254780299 and protein with PDBid: 1w07_A

>1w07_A Acyl-COA oxidase; oxidoreductase, peroxisomal beta-oxidation, FAD cofactor; HET: FAD; 2.0A {Arabidopsis thaliana} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 2fon_A*
Probab=100.00  E-value=0  Score=397.05  Aligned_cols=295  Identities=15%  Similarity=0.129  Sum_probs=250.0

Q ss_pred             CHHHHHH-HHHHHH--CCHHHHHHHHHHHCCCCCCHHHCCCCCCCCCEEEEECCCCCCCCCHHHCCEEEEECCC-CEEEE
Q ss_conf             1356778-999985--0878898730120010005442660015521235544588888786654302786489-66898
Q gi|254780299|r  153 SPSVTSA-SMVALM--TTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISD-GIYCL  228 (562)
Q Consensus       153 p~~mt~~-a~~~L~--~~~e~~~~~lp~l~s~~~~~~~~~~~~k~g~~~~~~lTEp~~GSDv~~~~T~A~~~gd-g~y~L  228 (562)
                      |+.+..+ .+++|.  +|+||+++|+|++.+++.             +++++||||++|||+.+++|+|+++++ ++|+|
T Consensus        98 ~~~vh~~lf~~~I~~~GT~eQk~~~L~~~~~g~~-------------~g~~a~TE~g~GSd~~~l~TtA~~d~~g~~fvL  164 (659)
T 1w07_A           98 YVDLHWGMFVPAIKGQGTEEQQKKWLSLANKMQI-------------IGCYAQTELGHGSNVQGLETTATLDPKTDEFVI  164 (659)
T ss_dssp             HHHHHHHTHHHHHHHHSCHHHHHHHHHHHHTTSS-------------CEEEECCBTTBSSCGGGCCCEEEEETTTTEEEE
T ss_pred             HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCH-------------HEEEEECCCCCCCCHHHCEEEEEEECCCCEEEE
T ss_conf             6645998899999876999999999999968984-------------508771689878763438559999579987997


Q ss_pred             CC-----EEEEEEC--CCCCEEEEEEECC-----CCCEEEEEECCCCC--CCCCCEEEEEECCCCC---CCCCCEEEEEE
Q ss_conf             45-----1468634--2115799970469-----96179998775898--8403478863047554---56577279998
Q gi|254780299|r  229 SG-----HKWFLSS--PMSDAFIMLAQVE-----GRVGCFLVPRLLED--GSPNGLCYQRLKNKIG---NRSNATVELEF  291 (562)
Q Consensus       229 nG-----~Kwf~sa--~~ad~~lVlArt~-----~Gls~FlVp~~~pg--g~~n~v~i~r~~~klG---~r~~~t~ei~f  291 (562)
                      ||     +|||+++  ..+|+++|+||+.     .|+++|+||.+.++  ...+||++.++++|+|   .++++++++.|
T Consensus       165 ng~k~~~tK~wi~~~g~~a~~~vV~Ar~~~~g~~~Gi~~FlVp~rd~~~~~~~pGV~v~~~~~K~G~~g~~~~d~g~l~F  244 (659)
T 1w07_A          165 HTPTQTASKWWPGGLGKVSTHAVVYARLITNGKDYGIHGFIVQLRSLEDHSPLPNITVGDIGTKMGNGAYNSMDNGFLMF  244 (659)
T ss_dssp             ECCSGGGSEECCTTTTTTCSEEEEEEEEEETTEEEEEEEEEEECBCTTTCCBCTTEEEEECCCBSSSSGGGGSCCEEEEE
T ss_pred             CCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEE
T ss_conf             56120178731368754276899999937887768734899985146777899975983064555665567777414674


Q ss_pred             CCEEE---EEECCCCC------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-------H
Q ss_conf             69075---30077765------------79999997301333579999999999999999998404622242-------3
Q gi|254780299|r  292 SNTFG---FLLGDLNV------------STGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGI-------L  349 (562)
Q Consensus       292 ~~~~~---~llG~~g~------------G~~~i~~~l~~~Rl~~a~~~~G~ar~al~~A~~yA~~R~~fG~~-------L  349 (562)
                      ++|++   ++||+.++            +.+.++..++..|+.+++.++|++++|+++|+.|+++|+|||+|       |
T Consensus       245 d~VrVP~~~lLg~~~~v~~~G~~~~~~~~~~~~~~~l~~~R~~iaa~a~g~~~~al~~a~~Ya~~R~qfG~~~~~~e~~i  324 (659)
T 1w07_A          245 DHVRIPRDQMLMRLSKVTREGEYVPSDVPKQLVYGTMVYVRQTIVADASNALSRAVCIATRYSAVRRQFGAHNGGIETQV  324 (659)
T ss_dssp             SSEEEEGGGBCCSSEEECTTCCEEECSSCGGGCTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCBCSCC---CCCCBG
T ss_pred             EEEEECHHHCCCHHCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCHH
T ss_conf             01545689806031255777632212408999999999887888998899999999999889741665798887642138


Q ss_pred             HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             5388889999999999999999999999887201110-----36777655679999999999999999569988521300
Q gi|254780299|r  350 IDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-----SEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGY  424 (562)
Q Consensus       350 ~~~p~v~~~LAdm~~~~eaa~~l~~~~A~~~D~~~~~-----~~~~a~arl~t~iaK~~~~e~a~~v~~~Aiqi~GG~Gy  424 (562)
                      ++||.+|++|++|.+.+++++.+.+.+++.++.....     .........+++++|+++++.+.+++++|+|++||+||
T Consensus       325 ~~~q~~q~rL~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~e~~al~a~~K~~~t~~a~~v~~~a~q~~GG~Gy  404 (659)
T 1w07_A          325 IDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTERLAASDFATLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGY  404 (659)
T ss_dssp             GGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEC
T ss_conf             75255799999999999999999999999999998766324522217899999999999877899999999997689432


Q ss_pred             CCCCHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHCC
Q ss_conf             045518898500122322046222789999998312
Q gi|254780299|r  425 IEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK  460 (562)
Q Consensus       425 ~ee~~leRl~RDA~v~~I~EGt~~I~aldv~r~l~r  460 (562)
                      ++++|++|+|||++++.||||||+||.+.+.|.|.|
T Consensus       405 ~~~~~l~r~~rDa~~~~i~EG~n~Vl~~~~ar~Llk  440 (659)
T 1w07_A          405 LWCSGLPELFAVYVPACTYEGDNVVLQLQVARFLMK  440 (659)
T ss_dssp             BGGGSHHHHHHHHGGGGTTTSCHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHH
T ss_conf             478819999988348366637899999999999999