HHsearch results for GI: 254780299 and protein with PDBid: 2dvl_A
>2dvl_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: FAD; 2.50A {Thermus thermophilus HB8}
Probab=100.00 E-value=0 Score=420.08 Aligned_cols=329 Identities=22% Similarity=0.280 Sum_probs=283.8
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHH--HHHHHHH-HCCHHHHHHHHHHHCC
Q ss_conf 999999996796203377666644476379999999998301445312213567--7899998-5087889873012001
Q gi|254780299|r 104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVT--SASMVAL-MTTPRVHKDWAPKIFS 180 (562)
Q Consensus 104 ~~l~~~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~cp~~mt--~~a~~~L-~~~~e~~~~~lp~l~s 180 (562)
++.++...+.||.++.++.++|+.+... +..+......+.......+...++ ......+ .++++++++|++.+.+
T Consensus 37 ~~~~~~l~e~G~~~l~vP~~~GG~g~~~--~~~~~v~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 114 (372)
T 2dvl_A 37 WPQLKALAELGLLGMTTPEEWGGVGLDS--VTWALALEELAAADPSVAVIVSVTSGLPQYMLLRFGSEAQKRRYLVPLAR 114 (372)
T ss_dssp HHHHHHHHHTTGGGTTSCGGGTSCCCCH--HHHHHHHHHHHHHCHHHHHHHHHHTSHHHHHHHHHCCHHHHHHTHHHHHT
T ss_pred HHHHHHHHHCCCCCCCCCHHHCCCCCCH--HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHC
T ss_conf 9999999977997778985449999999--99999999998604554322233110689999972999999988788745
Q ss_pred CCCCHHHCCCCCCCCCEEEEECCCCCCCCCHHHCCEEEEECCCCEEEECCEEEEEEC-CCCCEEEEEEECCCCCEEEEEE
Q ss_conf 000544266001552123554458888878665430278648966898451468634-2115799970469961799987
Q gi|254780299|r 181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEGRVGCFLVP 259 (562)
Q Consensus 181 ~~~~~~~~~~~~k~g~~~~~~lTEp~~GSDv~~~~T~A~~~gdg~y~LnG~Kwf~sa-~~ad~~lVlArt~~Gls~FlVp 259 (562)
++. +.++++|||.+|||+..++|+|++++|| |+|||+|+|+|+ +.+|+++|+||+++|+++|+||
T Consensus 115 G~~-------------~~~~~~tE~~~gs~~~~~~t~a~~~~gg-~~l~G~k~~~s~~~~ad~~~v~a~~~~g~~~~lVp 180 (372)
T 2dvl_A 115 GEW-------------IGAFCLTEPQAGSDAKSLRAEARRVKGG-FVLNGVKSWITSAGHAHLYVVMARTEKGISAFLVE 180 (372)
T ss_dssp TSS-------------CEEEECCCSSCSSCGGGCCCEEEEETTE-EEEEEEEEEEETTTTCSEEEEEEEETTEEEEEEEE
T ss_pred CCC-------------CCCCCCCCCCCCCCCCCCEEEEEEECCE-EEEEEEEEEECCCHHCCEEEEEEECCCCCEEEEEE
T ss_conf 872-------------2455667887788744423589984998-99998999678802369999999869972799997
Q ss_pred CCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCEEE---EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 7589884034788630475545657727999869075---3007776579999997301333579999999999999999
Q gi|254780299|r 260 RLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAI 336 (562)
Q Consensus 260 ~~~pgg~~n~v~i~r~~~klG~r~~~t~ei~f~~~~~---~llG~~g~G~~~i~~~l~~~Rl~~a~~~~G~ar~al~~A~ 336 (562)
++.|| |++.+.++++|+|+++++.+.|+||++ ++||++|+|+..++..++.+|+.+++.++|+++++++.++
T Consensus 181 ~~~~G-----v~v~~~~~~~Gl~~t~s~~v~f~~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~lG~a~~al~~~~ 255 (372)
T 2dvl_A 181 KGTPG-----LSFGRPEEKMGLHAAHTAEVRLEEVFVPEENLLGEEGRGLAYALAGLDSGRVGVAAQAVGIARGAFEIAK 255 (372)
T ss_dssp TTCTT-----EEECCCCCCSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCC-----EEECCCCCCCCCCCCCEEEEEEEEEEECHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88996-----6953764557688775379999516975998089889669999998999999999999999999999999
Q ss_pred HHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99840462224235388889999999999999999999999887201110367776556799999999999999995699
Q gi|254780299|r 337 HYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAM 416 (562)
Q Consensus 337 ~yA~~R~~fG~~L~~~p~v~~~LAdm~~~~eaa~~l~~~~A~~~D~~~~~~~~~a~arl~t~iaK~~~~e~a~~v~~~Ai 416 (562)
+|+++|++||+|+.++|.+|++|+++.+.+++++.+++++++..|.+.... ..++++|+++++.+.+++++++
T Consensus 256 ~~~~~R~~~g~~~~~~~~vq~~la~~~~~~~~~~~~~~~a~~~~d~~~~~~-------~~~~~ak~~~~~~a~~~~~~a~ 328 (372)
T 2dvl_A 256 AYAEEREQFGKKLKEHQAIAFKIADMHVKIAAARALVLEAARKKDRGERFT-------LEASAAKLFASAAAVEVTREAV 328 (372)
T ss_dssp HHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCH-------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH-------HHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999851532997525899999999867689999999999977654387527-------9999999999999999999999
Q ss_pred HHHCCCCCCCCCHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHCC
Q ss_conf 88521300045518898500122322046222789999998312
Q gi|254780299|r 417 ECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK 460 (562)
Q Consensus 417 qi~GG~Gy~ee~~leRl~RDA~v~~I~EGt~~I~aldv~r~l~r 460 (562)
|++||.||..++|++|+|||+++.+|+|||++||++.+.|.|.|
T Consensus 329 ~~~Gg~g~~~~~~l~r~~Rda~~~~i~~Gt~~v~~~~iar~llr 372 (372)
T 2dvl_A 329 QVLGGYGYHRDYRVERYYRDAKVTEIYEGTSEIQRLVIARELYR 372 (372)
T ss_dssp HHTGGGGGSGGGSHHHHHHHHHGGGTTTSCHHHHHHHHHHHHHC
T ss_pred HHHCCCHHCCCCHHHHHHHHCCCCEEECCHHHHHHHHHHHHHCC
T ss_conf 97084040576789999986051256267699999999999668