HHsearch results for GI: 254780299 and protein with PDBid: 2rfq_A
>2rfq_A 3-HSA hydroxylase, oxygenase; rhodococcus SP. RHA1, structural genomics, PSI-2, protein structure initiative; HET: 1PS; 1.65A {Rhodococcus SP} PDB: 3aff_A 3afe_A
Probab=100.00 E-value=1.7e-41 Score=295.16 Aligned_cols=319 Identities=15% Similarity=0.082 Sum_probs=232.4
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC-C-HHHHHHHHHHHCCCC
Q ss_conf 99999996796203377666644476379999999998301445312213567789999850-8-788987301200100
Q gi|254780299|r 105 ALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMT-T-PRVHKDWAPKIFSRE 182 (562)
Q Consensus 105 ~l~~~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~cp~~mt~~a~~~L~~-~-~e~~~~~lp~l~s~~ 182 (562)
++++...+.||.++.++.++++.+.. ....+.....++..+......+.+.......+.. . +.++..|.
T Consensus 39 e~~~~l~~~Gl~~~~iP~e~GG~g~~--~~~~~~v~e~la~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 109 (394)
T 2rfq_A 39 DSMKALQETGFFRLLQPEQWGGYQAD--PVLFYSAVRKIASACGSTGWVSSIIGVHNWHLALFSQQAQEDVWG------- 109 (394)
T ss_dssp HHHHHHHHHTGGGTTSCGGGTCCCCC--HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTSCHHHHHHHHS-------
T ss_pred HHHHHHHHCCCCCCCCCHHHCCCCCC--HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCC-------
T ss_conf 99999997799887899767899989--999999999998768204678876205789998558999987625-------
Q ss_pred CCHHHCCCCCCCCCEEEEECCCCCCCCCHHHCCEEEEECCCCEEEECCEEEEEEC-CCCCEEEEEEECCC-----CCEEE
Q ss_conf 0544266001552123554458888878665430278648966898451468634-21157999704699-----61799
Q gi|254780299|r 183 YDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVEG-----RVGCF 256 (562)
Q Consensus 183 ~~~~~~~~~~k~g~~~~~~lTEp~~GSDv~~~~T~A~~~gdg~y~LnG~Kwf~sa-~~ad~~lVlArt~~-----Gls~F 256 (562)
..+++..+++. ...+++++++|| |+|||+|+|+|+ +.+|+++|+|+++. ++.+|
T Consensus 110 ------------------~~~~~~~~~~~-~~~~~a~~~~gg-~~lnG~K~~is~~~~Ad~~~v~a~~~~~~~~~~~~~~ 169 (394)
T 2rfq_A 110 ------------------NDTDVRISSSY-APMGAGQVVDGG-YTVNGAWAWSSGCDHASWAVLGGPVIKDGRPVDFVSF 169 (394)
T ss_dssp ------------------SCTTCCEEEEC-SCSEEEEEETTE-EEEEEEEEEETTGGGCSEEEEEEEEEETTEEEEEEEE
T ss_pred ------------------CCCCCCCCCCC-CCCCEEEEECCE-EEEEEEEECCCCCCCCHHCCCCCCCCCCCCCCCEEEE
T ss_conf ------------------78763222343-446316897897-8998689604787521000123444323466532777
Q ss_pred EEECCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCEEE---EEECCCCCHHHH------------HHHHHHHHHHHHH
Q ss_conf 9877589884034788630475545657727999869075---300777657999------------9997301333579
Q gi|254780299|r 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFG---FLLGDLNVSTGP------------VEDMKILIYLDSA 321 (562)
Q Consensus 257 lVp~~~pgg~~n~v~i~r~~~klG~r~~~t~ei~f~~~~~---~llG~~g~G~~~------------i~~~l~~~Rl~~a 321 (562)
.+|+ + ++++.+.++++|+++++|+++.|+||++ +++|+++.|... .+.++...++.++
T Consensus 170 ~~~~--~-----gv~v~~~~~~~Glr~t~s~~v~f~~v~Vp~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 242 (394)
T 2rfq_A 170 LIPR--E-----DYRIDDVWNVVGLRGTGSNTVVVEDVFVPTHRVLSFKAMSNLTAPGLERNTAPVYKMPWGTIHPTTIS 242 (394)
T ss_dssp EEEG--G-----GCEEECCCCBSSCGGGCCEEEEEEEEEEEGGGEEEHHHHHTTCCGGGTTCCCGGGGSCHHHHHHHHHH
T ss_pred ECCC--C-----CEEEEECCCCCCCCCCCCCCCEEECEEECHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 5388--7-----33893234657644677666311033725577005445443113100022179999988999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCC---CCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-HHHHHHHHHHH
Q ss_conf 99999999999999999840462---224235388889999999999999999999999887201110-36777655679
Q gi|254780299|r 322 IMSVSGMRVSLAEAIHYARRRHV---SGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSR-SEEAAYARIMA 397 (562)
Q Consensus 322 ~~~~G~ar~al~~A~~yA~~R~~---fG~~L~~~p~v~~~LAdm~~~~eaa~~l~~~~A~~~D~~~~~-~~~~a~arl~t 397 (562)
+.++|+++++++.+++|+++|++ ||+||.++|.+|++|++|..++++++.++++.++..+..... .......++.+
T Consensus 243 a~~lG~a~~al~~a~~~~~~R~~~~~~g~~l~~~~~v~~~la~~~~~l~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (394)
T 2rfq_A 243 APIVGMAYGAYDAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEASSDIDAAWRQLSGNVADEYALLVAGEEVPFELRLRA 322 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCTTCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
T ss_conf 99977899999999999970544556777354356889999999999999999999999999864434775678999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHCCCCHHHHHHHH-HHHHC
Q ss_conf 999999999999999569988521300045518898500122322046222789999-99831
Q gi|254780299|r 398 PITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDV-LNLLE 459 (562)
Q Consensus 398 ~iaK~~~~e~a~~v~~~Aiqi~GG~Gy~ee~~leRl~RDA~v~~I~EGt~~I~aldv-~r~l~ 459 (562)
.++|.++++.+.+++++++|++||.||++++|++|+|||+++.+|+.+++-++..+. .|.+.
T Consensus 323 ~~ak~~a~e~~~~v~~~a~~~~Gg~gy~~~~~ler~~RD~~a~~~h~~~~~~~~~~~~g~~~l 385 (394)
T 2rfq_A 323 RRDQVRATGRAISSIDKLFESSGATALANGTPLQRFWRDAHAGRVHAANDPERAYVMYGTGEF 385 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHGGGGGBTTCHHHHHHHHHHHHTTSGGGCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC
T ss_conf 999999999999999999998689988269859999999879883136569999999999965