HHsearch results for GI: 254780299 and protein with PDBid: 2yyk_A

Probab=99.98  E-value=1.2e-29  Score=215.62  Aligned_cols=309  Identities=15%  Similarity=0.106  Sum_probs=209.3

Q ss_pred             CCCCCCEEECCHHHHHHHHHHH---HC----------------CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
Q ss_conf             9852136566889999999999---67----------------9620337766664447637999999999830144531
Q gi|254780299|r   90 GGERWDKVEFHPAWHALLRRSI---HD----------------GLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGH  150 (562)
Q Consensus        90 ~G~r~d~v~~~p~~~~l~~~~~---~~----------------Gl~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~g~  150 (562)
                      .|+||+.|..||.++...+...   ..                +..+..|..+...    .-...+.....+|++...|.
T Consensus        22 ~Ge~v~dvt~Hp~fr~~~~~~A~~YD~~~~~~~~d~lt~~~~g~~~~~~~~~p~s~----edL~~r~~~~~~~a~~~~g~   97 (481)
T 2yyk_A           22 KGEKVEDPTTHPVFRGIVRTMAALYDLQHDPRYREVLTYEEEGKRHGMSFLIPKTK----EDLKRRGQAYKLWADQNLGM   97 (481)
T ss_dssp             TTEECSCTTTSTTTHHHHHHHHHHHHHTTSTTTHHHHEEEETTEEEEGGGCCCCSH----HHHHHHHHHHHHHHHHTTTC
T ss_pred             CCEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCEEEEEEECCCCH----HHHHHHHHHHHHHHHHCCCE
T ss_conf             99982677878666899999998741326913236131035895753345478999----99999999999999855940


Q ss_pred             CC--CHHHHHHHHHHHHC-------CHHHHHHHHHHHCCCCCCHHHCCCCCCCCCEEEEECCCCCCCCCHHH--------
Q ss_conf             22--13567789999850-------87889873012001000544266001552123554458888878665--------
Q gi|254780299|r  151 LM--SPSVTSASMVALMT-------TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAA--------  213 (562)
Q Consensus       151 ~c--p~~mt~~a~~~L~~-------~~e~~~~~lp~l~s~~~~~~~~~~~~k~g~~~~~~lTEp~~GSDv~~--------  213 (562)
                      ++  |-.+.. .+..+..       ..+.+.+|++.+..+             ...++.+||||+++++...        
T Consensus        98 ~gr~pd~~~~-~~~~~~~~~~~~~~y~e~~~~y~~~~~~~-------------dl~~~~a~tdP~~dRs~~~~~q~d~~~  163 (481)
T 2yyk_A           98 MGRSPDYLNA-VVMAYAASADYFGEFAENVRNYYRYLRDQ-------------DLATTHALTNPQVNRARPPSGQPDPYI  163 (481)
T ss_dssp             CCCCTHHHHH-HHHHHHHTGGGGGGGHHHHHHHHHHHHHH-------------TCCEEEEECCCCCCTTC----CCCSCS
T ss_pred             ECCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------------CEEEEECCCCCCCCCCCCHHHCCCCCC
T ss_conf             0027688778-99888650777668999999999999857-------------935542056898876668333477654


Q ss_pred             CCEEEEECCCCEEEECCEEEEEECCCCCEEEEE-EECC-----CCCEEEEEECCCCCCCCCCEEEEEECCCCCCC-----
Q ss_conf             430278648966898451468634211579997-0469-----96179998775898840347886304755456-----
Q gi|254780299|r  214 ITSQGQKISDGIYCLSGHKWFLSSPMSDAFIML-AQVE-----GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNR-----  282 (562)
Q Consensus       214 ~~T~A~~~gdg~y~LnG~Kwf~sa~~ad~~lVl-Art~-----~Gls~FlVp~~~pgg~~n~v~i~r~~~klG~r-----  282 (562)
                      ..+..++++|| |+|||.|.|+|++.++.++|+ +++.     ++.++|+||.++||     |++...+.+.|.+     
T Consensus       164 ~~~Vv~~~~dG-~vv~GaK~~~T~a~~~~~~v~~~~~~~~~~~~~a~~F~VP~dtpG-----v~~i~r~~~~g~~~~~d~  237 (481)
T 2yyk_A          164 PVGVVKQTEKG-IVVRGARMTATFPLADEVLIFPSILLQAGSEKYALAFALPTSTPG-----LHFVCREALVGGDSPFDH  237 (481)
T ss_dssp             BCEEEEECSSE-EEEEEEEEEEECCCSSEEEECCCSCCCTTCGGGCEEEEEETTCTT-----EEEEECCCCCCCSCTTTC
T ss_pred             CCEEEEECCCE-EEEEEEEHHHCCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCC-----EEEEEECCCCCCCCCCCC
T ss_conf             52378881987-999755474348873768999435689998781699998569997-----089841555776664557


Q ss_pred             ------CCCEEEEEECCEEE---EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCC
Q ss_conf             ------57727999869075---300777657999999730133357999999999999999999840462224235388
Q gi|254780299|r  283 ------SNATVELEFSNTFG---FLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP  353 (562)
Q Consensus       283 ------~~~t~ei~f~~~~~---~llG~~g~G~~~i~~~l~~~Rl~~a~~~~G~ar~al~~A~~yA~~R~~fG~~L~~~p  353 (562)
                            ...+++|.||||.+   ++++. |++...........+........+.++.+..+.+.++..|.+||.+|.++|
T Consensus       238 pls~~~~e~da~vvFDdV~VP~e~Vf~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~r~a~~~gi~~~~  316 (481)
T 2yyk_A          238 PLSSRVEEMDCLVIFDDVLVPWERVFIL-GNVELCNNAYGATGALNHMAHQVVALKTAKTEAFLGVAALMAEGIGADVYG  316 (481)
T ss_dssp             TTTTTCCCCEEEEEEEEEEEEGGGEEEE-SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGSH
T ss_pred             CCCCCCCCCCEEEEECCCCCCHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
T ss_conf             7643447872399971632669996305-765888999988789999999999999999999999999988535811035


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             8899999999999999999999998872011103677765567999999999999999956998852130004
Q gi|254780299|r  354 VMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIE  426 (562)
Q Consensus       354 ~v~~~LAdm~~~~eaa~~l~~~~A~~~D~~~~~~~~~a~arl~t~iaK~~~~e~a~~v~~~Aiqi~GG~Gy~e  426 (562)
                      .||.+|+||.+.+|+++++++.++...+......--  --+..+.++|+++++...+++ +.+|.+||.|++.
T Consensus       317 ~Vq~kLaem~~~~E~~~al~~aa~~~a~~~~~G~~~--Pd~~~a~aak~~~~~~~~~i~-e~l~~i~Ggg~i~  386 (481)
T 2yyk_A          317 HVQEKIAEIIVYLEAMRAFWTRAEEEAKENAYGLLV--PDRGALDGARNLYPRLYPRIR-EILEQIGASGLIT  386 (481)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTCEECTTSCEE--CCHHHHHHHHHHHHHHHHHHH-HHHHHHHGGGGSC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC--CCHHHHHHHHHHHHHHHHHHH-HHHHHHCCCCEEE
T ss_conf             799999999999999999999999723368787433--489999999999887699999-9999960778663