HHsearch results for GI: 254780299 and protein with PDBid: 2z1q_A

>2z1q_A Acyl-COA dehydrogenase; FAD, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: FAD; 2.30A {Thermus thermophilus HB8}
Probab=100.00  E-value=0  Score=487.62  Aligned_cols=336  Identities=22%  Similarity=0.280  Sum_probs=285.6

Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCH-HHHH-HHHHHH-HCCHHHHHHHHHHHCC
Q ss_conf             999999996796203377666644476379999999998301445312213-5677-899998-5087889873012001
Q gi|254780299|r  104 HALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSP-SVTS-ASMVAL-MTTPRVHKDWAPKIFS  180 (562)
Q Consensus       104 ~~l~~~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~cp~-~mt~-~a~~~L-~~~~e~~~~~lp~l~s  180 (562)
                      +++++...+.||.++.++.++|+.+.  +.+..+.....++... +...++ ..+. +...++ .++++|+.+|+|++.+
T Consensus        63 ~~l~~~l~e~Gl~~l~vP~e~GG~g~--~~~~~~~v~e~la~~~-~~~~~~~~~~~~~~~~l~~~gt~eqk~~~L~~~~~  139 (577)
T 2z1q_A           63 VPLMRKAGELGLLAIDVPEEYGGLDL--PKVISTVVAEELSGSG-GFSVTYGAHTSIGTLPLVYFGTEEQKRKYLPKLAS  139 (577)
T ss_dssp             HHHHHHHHHTTTTSTTSCGGGTCCCC--CHHHHHHHHHHHTTSC-THHHHHHHHHTTTTHHHHHHCCHHHHHTTHHHHHH
T ss_pred             HHHHHHHHHCCCCCCCCCHHCCCCCC--CHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
T ss_conf             99999999779988898820099998--8999999999987647-27789999999999999984999999987266508


Q ss_pred             CCCCHHHCCCCCCCCCEEEEECCCCCCCCCHHHCCEEEEECCCC-EEEECCEEEEEEC-CCCCEEEEEEECC-CCCEEEE
Q ss_conf             00054426600155212355445888887866543027864896-6898451468634-2115799970469-9617999
Q gi|254780299|r  181 REYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDG-IYCLSGHKWFLSS-PMSDAFIMLAQVE-GRVGCFL  257 (562)
Q Consensus       181 ~~~~~~~~~~~~k~g~~~~~~lTEp~~GSDv~~~~T~A~~~gdg-~y~LnG~Kwf~sa-~~ad~~lVlArt~-~Gls~Fl  257 (562)
                      +++             +.++++|||++|||+....|+++...|| +|+|||+|||+|+ +.+|+++|+||++ +|+|+|+
T Consensus       140 G~~-------------~~~~a~te~~~gs~~~~~~~~~~~~~~g~~~~l~G~K~~it~~~~A~~~~V~ar~~~~g~s~fl  206 (577)
T 2z1q_A          140 GEW-------------IAAYCLTEPGSGSDALAAKTRATLSEDGKHYILNGVKQWISNAGFAHLFTVFAKVDGEHFTAFL  206 (577)
T ss_dssp             TSS-------------CEEEECCBTTBSSSGGGCCCEEEECTTSSEEEEEEEEEEEETTTTCSEEEEEEEETTTEEEEEE
T ss_pred             CCH-------------HHHHHHCCCCCCCCCCCCCCEEEEECCCCEEEEEEEEECCCCCCCCCEEEEEEEECCCCEEEEE
T ss_conf             838-------------8875650775545521001134770799879998799665567767689999980898558999


Q ss_pred             EECCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCEE---EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             87758988403478863047554565772799986907---530077765799999973013335799999999999999
Q gi|254780299|r  258 VPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAE  334 (562)
Q Consensus       258 Vp~~~pgg~~n~v~i~r~~~klG~r~~~t~ei~f~~~~---~~llG~~g~G~~~i~~~l~~~Rl~~a~~~~G~ar~al~~  334 (562)
                      ||++.||     |++.+.++|+|+|+++++++.|+||+   .++||++|+|+++++.+++.+|+.+++.++|+++++++.
T Consensus       207 V~~~~pG-----v~i~~~~~~~G~r~~~~~~v~f~dv~VP~~~llG~~g~G~~~~~~~l~~~Rl~~aa~~~G~a~~al~~  281 (577)
T 2z1q_A          207 VERDTPG-----LSFGPEEKKMGIKASSTRQVILEDVKVPVENVLGEIGKGHKIAFNVLNVGRYKLGAGAVGGAKRALEL  281 (577)
T ss_dssp             EETTCTT-----EEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESCTTCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EECCCCC-----EEECCCCCCCCCCCCCEEEEEEECEEECHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9789997-----58547756667877873699982638459991899881899999989999999999999999999999


Q ss_pred             HHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH-------HHHHHHHHHHHHHHHHHHH
Q ss_conf             999984046222423538888999999999999999999999988720111036-------7776556799999999999
Q gi|254780299|r  335 AIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSE-------EAAYARIMAPITKYWCCKM  407 (562)
Q Consensus       335 A~~yA~~R~~fG~~L~~~p~v~~~LAdm~~~~eaa~~l~~~~A~~~D~~~~~~~-------~~a~arl~t~iaK~~~~e~  407 (562)
                      +++|+++|+|||+||++||.||++|++|.+++++++++++++++.+|++.....       .....++.++++|+++++.
T Consensus       282 a~~ya~~R~qfG~pi~~~q~v~~~la~~~~~~~a~~~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~~~a~aK~~~~e~  361 (577)
T 2z1q_A          282 SAQYATQRVQFGRPIGRFGLIQQKLGEMASRIYAAESAVYRTVGLIDEALLGKKGPEAVMAGIEEYAVEASIIKVLGSEV  361 (577)
T ss_dssp             HHHHHHHCBCSSSBGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf             99999853315887753324999999999999999999999999997530146787988715366689999999996799


Q ss_pred             HHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHCC
Q ss_conf             99999569988521300045518898500122322046222789999998312
Q gi|254780299|r  408 APAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEK  460 (562)
Q Consensus       408 a~~v~~~Aiqi~GG~Gy~ee~~leRl~RDA~v~~I~EGt~~I~aldv~r~l~r  460 (562)
                      +.+++++|||++||+||++++|++|+|||++++.||||||+||++++.+.+.+
T Consensus       362 ~~~~~~~a~qi~GG~G~~~~~~l~r~~RDar~~~i~eGt~~i~r~~ia~~~l~  414 (577)
T 2z1q_A          362 LDYVVDEGVQIHGGYGYSQEYPIERAYRDARINRIFEGTNEINRLLIPGMLLR  414 (577)
T ss_dssp             HHHHHHHHHHHHGGGGGBTTSHHHHHHHHHGGGGTTTSCHHHHHHHTTGGGSC
T ss_pred             HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHH
T ss_conf             99989999997087777778879999976111024178499999999999999