PSIBLAST alignment of GI: 254780299 and protein with PDB id: 1jqi

>gi|20150494|pdb|1JQI|A Chain A, Crystal Structure Of Rat Short Chain Acyl-Coa Dehydrogenase Complexed With Acetoacetyl-Coa Length = 388
>gi|20150495|pdb|1JQI|B Chain B, Crystal Structure Of Rat Short Chain Acyl-Coa Dehydrogenase Complexed With Acetoacetyl-Coa Length = 388
 Score =  263 bits (671), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 73/362 (20%), Positives = 135/362 (37%), Gaps = 34/362 (9%)

Query: 112 HDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPSVTSASMVALMTTPRVH 171
             GL                     A           G +MS + +      L       
Sbjct: 52  ELGLLAMDVPEELSGAGLDYLAYSIALEEISRGCASTGVIMSVNNSLYLGPIL------- 104

Query: 172 KDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAITSQGQKISDGIYCLSGH 231
                K  S +       P           L+E   G+D  A ++  ++  D  + L+G 
Sbjct: 105 -----KFGSSQQKQQWITPFTNGDKIGCFALSEPGNGSDAGAASTTAREEGD-SWVLNGT 158

Query: 232 KWFLSSPM-SDAFIMLAQVE-----GRVGCFLVPRLLEDGSPNGLCYQRLKNKIGNRSNA 285
           K ++++   + A ++ A  +       +  FLVP          L   + ++K+G R+++
Sbjct: 159 KAWITNSWEASATVVFASTDRSRQNKGISAFLVPMPTPG-----LTLGKKEDKLGIRASS 213

Query: 286 TVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGMRVSLAEAIHYARRR 342
           T  L F +       LLG+  +          +  +  A  ++   + SL  A+ YA  R
Sbjct: 214 TANLIFEDCRIPKENLLGEPGMGFKIAMQTLDMGRIGIASQALGIAQASLDCAVKYAENR 273

Query: 343 HVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKY 402
           H  G  L     ++  +AD+AL + +A  L++R A   D  K  ++E+A       + K 
Sbjct: 274 HAFGAPLTKLQNIQFKLADMALALESARLLTWRAAMLKDNKKPFTKESA-------MAKL 326

Query: 403 WCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSGNAMVLDVLNLLEKGT 462
              + A A+  +A++ +GG GY+ E    R+YR++    I  G+     L +   L +  
Sbjct: 327 AASEAATAISHQAIQILGGMGYVTEMPAERYYRDARITEIYEGTSEIQRLVIAGHLLRSY 386

Query: 463 NL 464
             
Sbjct: 387 RS 388