RPSBLAST alignment for GI: 254780299 and conserved domain: cd01153
>gnl|CDD|173842 cd01153, ACAD_fadE5, Putative acyl-CoA dehydrogenases similar to fadE5. Putative acyl-CoA dehydrogenase (ACAD). Mitochondrial acyl-CoA dehydrogenases (ACAD) catalyze the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. The ACD family includes the eukaryotic beta-oxidation, as well as amino acid catabolism enzymes. These enzymes share high sequence similarity, but differ in their substrate specificities. The mitochondrial ACD's are generally homotetramers and have an active site glutamate at a conserved position. Length = 407
Score = 109 bits (274), Expect = 3e-24
Identities = 81/336 (24%), Positives = 144/336 (42%), Gaps = 41/336 (12%)
Query: 148 AGHLMSPSVTSASMVALMT--TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEK 205
LM S T + L+ T + W P++ E+ T + LTE
Sbjct: 80 DAPLMYASGTQGAAATLLAHGTEAQREKWIPRLAEGEWTGT-------------MCLTEP 126
Query: 206 RGGTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAF-----IMLAQVEGR------VG 254
G+D+ A+ ++ +DG + ++G K F+S+ D ++LA+ EG +
Sbjct: 127 DAGSDLGALRTKAVYQADGSWRINGVKRFISAGEHDMSENIVHLVLARSEGAPPGVKGLS 186
Query: 255 CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKI 314
FLVP+ L+DG NG+ R++ K+G + T EL F N G L+G+ + + M
Sbjct: 187 LFLVPKFLDDGERNGVTVARIEEKMGLHGSPTCELVFDNAKGELIGEEGMGLAQMFAMMN 246
Query: 315 LIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQP--------VMKRAIADIALDI 366
L + A+ YA+ R G ++ P ++R++
Sbjct: 247 GARLGVGTQGTGLAEAAYLNALAYAKERKQGGDLIKAAPAVTIIHHPDVRRSLMTQKAYA 306
Query: 367 AAATALSFRLANSFDEAK-------SRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECI 419
+ AL A D A+ R +A A ++ P+ K + + A +++A++
Sbjct: 307 EGSRALDLYTATVQDLAERKATEGEDRKALSALADLLTPVVKGFGSEAALEAVSDAIQVH 366
Query: 420 GGSGYIEERSIARHYRESPANSILLGSGNAMVLDVL 455
GGSGY E I ++YR++ +I G+ LD++
Sbjct: 367 GGSGYTREYPIEQYYRDARITTIYEGTTGIQALDLI 402