RPSBLAST alignment for GI: 254780299 and conserved domain: cd01154

>gnl|CDD|173843 cd01154, AidB, Proteins involved in DNA damage response, similar to the AidB gene product. AidB is one of several genes involved in the SOS adaptive response to DNA alkylation damage, whose expression is activated by the Ada protein. Its function has not been entirely elucidated; however, it is similar in sequence and function to acyl-CoA dehydrogenases. It has been proposed that aidB directly destroys DNA alkylating agents such as nitrosoguanidines (nitrosated amides) or their reaction intermediates. Length = 418
 Score =  364 bits (936), Expect = e-101
 Identities = 170/433 (39%), Positives = 243/433 (56%), Gaps = 24/433 (5%)

Query: 37  YSSDSLLVALIANF-PSVVHKELELLGEYVLSCTAQELARMANYNTPQLHAYGPGGERWD 95
           Y  D +L   +  F       +L  LGE        ELAR+A+ N P L  +   G R D
Sbjct: 1   YLDDPVLQQTLRYFGDPEEEPDLSRLGELA-GGELYELARLADRNPPVLEMWDRWGRRVD 59

Query: 96  KVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEAGHLMSPS 155
           +V  HPAWHAL+RR I +G+          P    + H   AA  YL++   AG L   +
Sbjct: 60  RVWVHPAWHALMRRLIEEGVINIED----GPAGEGRRHVHFAAG-YLLSDAAAGLLCPLT 114

Query: 156 VTSASMVALMT-TPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGGTDIAAI 214
           +T A++ AL    P   K + P + S  Y         KT +  G  +TEK+GG+D+ A 
Sbjct: 115 MTDAAVYALRKYGPEELKQYLPGLLSDRY---------KTGLLGGTWMTEKQGGSDLGAN 165

Query: 215 TSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR------VGCFLVPRLLEDGSPN 268
            +  ++   G+Y L+GHKWF S+P++DA ++LA+ EG       +  FLVPRLLEDG+ N
Sbjct: 166 ETTAERSGGGVYRLNGHKWFASAPLADAALVLARPEGAPAGARGLSLFLVPRLLEDGTRN 225

Query: 269 GLCYQRLKNKIGNRSNATVELEFSNTFGFLLGDLNVSTGPVEDMKILIYLDSAIMSVSGM 328
           G   +RLK+K+G RS AT E+EF +   +L+GD       + +M  +  LD+A+ ++  M
Sbjct: 226 GYRIRRLKDKLGTRSVATGEVEFDDAEAYLIGDEGKGIYYILEMLNISRLDNAVAALGIM 285

Query: 329 RVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFDEA-KSRS 387
           R +L+EA HYAR R   G  LID P+M+R +A++ +D+ AATAL+FR A +FD A   + 
Sbjct: 286 RRALSEAYHYARHRRAFGKPLIDHPLMRRDLAEMEVDVEAATALTFRAARAFDRAAADKP 345

Query: 388 EEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANSILLGSG 447
            EA  AR+  P+ K   CK A  V +EAME  GG+GY+EE  +AR +RE+    I  G+G
Sbjct: 346 VEAHMARLATPVAKLIACKRAAPVTSEAMEVFGGNGYLEEWPVARLHREAQVTPIWEGTG 405

Query: 448 NAMVLDVLNLLEK 460
           N   LDVL +L K
Sbjct: 406 NIQALDVLRVLVK 418