RPSBLAST alignment for GI: 254780299 and conserved domain: cd01156
>gnl|CDD|173845 cd01156, IVD, Isovaleryl-CoA dehydrogenase. Isovaleryl-CoA dehydrogenase (IVD) is an is an acyl-CoA dehydrogenase, which catalyzes the third step in leucine catabolism, the conversion of isovaleryl-CoA (3-methylbutyryl-CoA) into 3-methylcrotonyl-CoA. IVD is a homotetramer and has the greatest affinity for small branched chain substrates. Length = 376
Score = 61.7 bits (150), Expect = 5e-10
Identities = 62/254 (24%), Positives = 120/254 (47%), Gaps = 34/254 (13%)
Query: 199 GLGLTEKRGGTDIAAITSQGQKISDGIYCLSGHK-WFLSSPMSDAFIMLAQVEGRVG--- 254
L ++E G+D+ ++ + +K D Y L+G K W + P +D ++ A+ + G
Sbjct: 119 ALAMSEPNAGSDVVSMKLRAEKKGDR-YVLNGSKMWITNGPDADTLVVYAKTDPSAGAHG 177
Query: 255 --CFLVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPV 309
F+V E G P Q+L +K+G R + T EL F + +LG N
Sbjct: 178 ITAFIV----EKGMPGFSRAQKL-DKLGMRGSNTCELVFEDCEVPEENILGGEN------ 226
Query: 310 EDMKILIY-LDSAIMSVSG-----MRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIA 363
+ + +L+ LD + ++G M+ +L AI YA +R G + + +++ +AD+
Sbjct: 227 KGVYVLMSGLDYERLVLAGGPIGIMQAALDVAIPYAHQRKQFGQPIGEFQLVQGKLADMY 286
Query: 364 LDIAAATALSFRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSG 423
+ A+ + + +A + D ++AA I+ + + A V +A++ +GG+G
Sbjct: 287 TRLNASRSYLYTVAKACDRGNMDPKDAAGV-IL------YAAEKATQVALDAIQILGGNG 339
Query: 424 YIEERSIARHYRES 437
YI + R R++
Sbjct: 340 YINDYPTGRLLRDA 353