RPSBLAST alignment of GI: 254780299 and protein with PDBid: 1egd
>1egd_A Medium chain acyl-COA dehydrogenase; flavoprotein, electron transfer; HET: FAD; 2.40A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 1egc_A* 1ege_A* 1t9g_A* 2a1t_A* 1udy_A* 3mdd_A* 3mde_A* Length = 396
Score = 124 bits (313), Expect = 4e-29
Identities = 60/373 (16%), Positives = 133/373 (35%), Gaps = 30/373 (8%)
Query: 89 PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPVVRKQAHKIRAARLYLMAQLEA 148
P +DK +P L+RR+ GL + + + +
Sbjct: 37 PVAAEYDKTGEYP--VPLIRRAWELGLMNTHIPENCGGLGLGTFDACLISEELAYGCTGV 94
Query: 149 GHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRGG 208
+ + + + + K + ++ + +TE G
Sbjct: 95 QTAIEGNSLGQMPIIIAGNDQQKKKYLGRMTEEP-------------LMCAYCVTEPGAG 141
Query: 209 TDIAAITSQGQKISDGIYCLSGHKWFLSS-PMSDAFIMLAQVE---GRVGCFLVPRLLED 264
+D+A I ++ +K D Y ++G K ++++ ++ + +LA+ + + +
Sbjct: 142 SDVAGIKTKAEKKGDE-YIINGQKMWITNGGKANWYFLLARSDPDPKAPANKAFTGFIVE 200
Query: 265 GSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKILIYLDSA 321
G+ R + +G R + T + F + +L A
Sbjct: 201 ADTPGIQIGRKELNMGQRCSDTRGIVFEDVKVPKENVLIGDGAGFKVAMGAFDKERPVVA 260
Query: 322 IMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFRLANSFD 381
+V + +L EA YA R G +L++ + +A++A+ + A R A D
Sbjct: 261 AGAVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAEMAMKVELARMSYQRAAWEVD 320
Query: 382 EAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYRESPANS 441
+ + A+ I K + +A + +A++ +GG+G+ E + + R++
Sbjct: 321 SGRRNTYYAS-------IAKAFAGDIANQLATDAVQILGGNGFNTEYPVEKLMRDAKIYQ 373
Query: 442 ILLGSGNAMVLDV 454
I G+ L V
Sbjct: 374 IYGGTSQIQRLIV 386