RPSBLAST alignment of GI: 254780299 and protein with PDBid: 1ukw
>1ukw_A Acyl-COA dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: FAD; 2.40A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1 Length = 379
Score = 111 bits (277), Expect = 6e-25
Identities = 57/253 (22%), Positives = 106/253 (41%), Gaps = 22/253 (8%)
Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVG-----CF 256
+E G+D AA+ ++ + D Y L+G K ++S ++ ++ A V +
Sbjct: 125 SEPGNGSDAAALKTRAIRQGDH-YVLNGTKMWISNGGEAEWVVVFATVNPELRHKGVVAL 183
Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMK 313
+V R G+P G ++ K+G R++ T EL F + LG+
Sbjct: 184 VVER----GTP-GFKAIKIHGKMGQRASGTYELVFEDVKVPVENRLGEEGEGFKIAMQTL 238
Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
+ A SV R +L EA YA+ R G + + ++ + D+ + I A +
Sbjct: 239 NKTRIPVAAGSVGVARRALDEARKYAKEREAFGEPIANFQAIQFKLVDMLIGIETARMYT 298
Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
+ A D+ + +A I K + ++A +A++ GG GY+ E + +
Sbjct: 299 YYAAWLADQGLPHAHASA-------IAKAYASEIAFEAANQAIQIHGGYGYVREFPVEKL 351
Query: 434 YRESPANSILLGS 446
R+ N I G+
Sbjct: 352 LRDVKLNQIYEGT 364