RPSBLAST alignment of GI: 254780299 and protein with PDBid: 1ukw

>1ukw_A Acyl-COA dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: FAD; 2.40A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1 Length = 379
 Score =  111 bits (277), Expect = 6e-25
 Identities = 57/253 (22%), Positives = 106/253 (41%), Gaps = 22/253 (8%)

Query: 203 TEKRGGTDIAAITSQGQKISDGIYCLSGHKWFLS-SPMSDAFIMLAQVEGRVG-----CF 256
           +E   G+D AA+ ++  +  D  Y L+G K ++S    ++  ++ A V   +        
Sbjct: 125 SEPGNGSDAAALKTRAIRQGDH-YVLNGTKMWISNGGEAEWVVVFATVNPELRHKGVVAL 183

Query: 257 LVPRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMK 313
           +V R    G+P G    ++  K+G R++ T EL F +        LG+            
Sbjct: 184 VVER----GTP-GFKAIKIHGKMGQRASGTYELVFEDVKVPVENRLGEEGEGFKIAMQTL 238

Query: 314 ILIYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALS 373
               +  A  SV   R +L EA  YA+ R   G  + +   ++  + D+ + I  A   +
Sbjct: 239 NKTRIPVAAGSVGVARRALDEARKYAKEREAFGEPIANFQAIQFKLVDMLIGIETARMYT 298

Query: 374 FRLANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARH 433
           +  A   D+    +  +A       I K +  ++A     +A++  GG GY+ E  + + 
Sbjct: 299 YYAAWLADQGLPHAHASA-------IAKAYASEIAFEAANQAIQIHGGYGYVREFPVEKL 351

Query: 434 YRESPANSILLGS 446
            R+   N I  G+
Sbjct: 352 LRDVKLNQIYEGT 364