RPSBLAST alignment of GI: 254780299 and protein with PDBid: 2d29

>2d29_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: FAD; 1.65A {Thermus thermophilus HB8} SCOP: a.29.3.1 e.6.1.1 PDB: 1ws9_A 2cx9_A* Length = 387

 Score = 99.1 bits (246), Expect = 2e-21
 Identities = 71/371 (19%), Positives = 145/371 (39%), Gaps = 40/371 (10%)

Query: 89  PGGERWDKVEFHPAWHALLRRSIHDGLHCSIWDRSFEPV-VRKQAHKIRAARLYLMAQLE 147
           PG    D+    P    L+R+    G+  ++   ++    +  +        +       
Sbjct: 28  PGAAERDRTGAFP--WDLVRKLAEFGVFGALVPEAYGGAGLSTRLFARMVEAIAYYDGAL 85

Query: 148 AGHLMSPSVTSASMVALMTTPRVHKDWAPKIFSREYDPTNKAPMQKTSVAIGLGLTEKRG 207
           A  + S +  +   + L  +    + + PK+ S E                  GLTE   
Sbjct: 86  ALTVASHNSLATGHILLAGSEAQKEAFLPKLASGE-------------ALGAWGLTEPGS 132

Query: 208 GTDIAAITSQGQKISDGIYCLSGHKWFLSSPMSDAFIMLAQVEGR---------VGCFLV 258
           G+D AA+ ++ +K+  G       ++     ++  ++++A+ +           +  F  
Sbjct: 133 GSDAAALKTKAEKVEGGWRLNGTKQFITQGSVAGVYVVMARTDPPPSPERKHQGISAFAF 192

Query: 259 PRLLEDGSPNGLCYQRLKNKIGNRSNATVELEFSNTF---GFLLGDLNVSTGPVEDMKIL 315
            R        GL   R + K+G  ++ T +L   + F     LLG+       V  +   
Sbjct: 193 FR-----PERGLKVGRKEEKLGLTASDTAQLILEDLFVPEEALLGERGKGFYDVLRVLDG 247

Query: 316 IYLDSAIMSVSGMRVSLAEAIHYARRRHVSGGILIDQPVMKRAIADIALDIAAATALSFR 375
             +  A M+V   + +L  A+ YA+ R   G  + +   +   +A+ A ++ AA  L  +
Sbjct: 248 GRIGIAAMAVGLGQAALDYALAYAKGREAFGRPIAEFEGVSFKLAEAATELEAARLLYLK 307

Query: 376 LANSFDEAKSRSEEAAYARIMAPITKYWCCKMAPAVIAEAMECIGGSGYIEERSIARHYR 435
            A   D  +  + EAA A       K +  + A     EA++ +GG GY+++  + R++R
Sbjct: 308 AAELKDAGRPFTLEAAQA-------KLFASEAAVKACDEAIQILGGYGYVKDYPVERYWR 360

Query: 436 ESPANSILLGS 446
           ++    I  G+
Sbjct: 361 DARLTRIGEGT 371