HHsearch alignment for GI: 254780300 and conserved domain: PRK02255

>PRK02255 putrescine carbamoyltransferase; Provisional.
Probab=100.00  E-value=0  Score=651.65  Aligned_cols=301  Identities=24%  Similarity=0.272  Sum_probs=273.1

Q ss_pred             CCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             77774178223899999999999999996442048775212897699996078733789999798761352111233332
Q gi|254780300|r    4 FPLYNFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQTSFEVAGKLLGVHVININTKNS   83 (316)
Q Consensus         4 f~~k~fL~~~dl~~~el~~ll~~A~~~k~~~~~~~~~~~~L~gk~~~~lF~kpStRTR~SFe~A~~~LGg~~i~l~~~~s   83 (316)
T Consensus         2 ~k~kh~L~~~Dls~~ei~~ll~~A~~~K~~~~~~~-~~~~L~gk~v~~lF~epSTRTR~SFE~A~~~LGg~~i~l~~~~~   80 (341)
T PRK02255          2 NKKRDFIDTQDYSKEEILYMIDLGLKLKEAIKNGA-YPQLLKNKSLGMIFEQPSTRTRVSFETAMTQLGGHAQYLAPGQI   80 (341)
T ss_pred             CCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCC-CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEECCCCCC
T ss_conf             98756472221999999999999999987775588-87557999899996789710799999999985997998276544


Q ss_pred             CCCCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC---CCCCCCC
Q ss_conf             1013334224799987413671465203210055420012342111123456631223322222220122---2100010
Q gi|254780300|r   84 AMKKGENIADTIATLNALRPNIIVIRHPYSGAVNSLMHKIKGPSIINAGDGTHEHPSQALLDAFAIRHFK---GKISNLH  160 (316)
Q Consensus        84 ~~~kgEs~~Dta~vls~~~~d~iv~R~~~~~~~~~~a~~~s~ppVINag~~~~~HP~Q~LaDl~Ti~e~~---g~l~~l~  160 (316)
T Consensus        81 sl~kgEsl~DT~~vls~~-~D~iviR~~~~~~~~~la~~~~vP-VIN-g~~~~~HPtQaL~Dl~Ti~e~~~~~~~l~glk  157 (341)
T PRK02255         81 HLGGHESIEDTARVLSRM-VDIIMARVLRHQTVVELAKYATVP-VIN-GMSDYNHPTQELGDVFTMLEHLPAGKKLEDCK  157 (341)
T ss_pred             CCCCCCCHHHHHHHHHHH-CCEEEEEECCCHHHHHHHHHCCCC-EEE-CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCE
T ss_conf             578876699999999863-788999934846799999867999-897-89988772789998999999860179845656


Q ss_pred             EEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCC-----------CCCCCCCCCCCHHHCCCCCCEEEEEEECCH
Q ss_conf             010355443301334466420134205532775322211-----------212343300584560368622100011331
Q gi|254780300|r  161 IAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKD-----------ISNMGVEVFHDMQKGLKNVDVIMILRMQQE  229 (316)
Q Consensus       161 ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~-----------~~~~~~~~~~d~~ea~~~aDvv~~~~~~~e  229 (316)
T Consensus       158 va~vGD--~~nv~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~~~~~g~~i~~~~d~~ea~~~aDvvytd~w~~~  235 (341)
T PRK02255        158 VVFVGD--ATQVCSSLMFITTKMGMDFVHFGPKGFQLPEEHLAIARENCEVSGGSVLVTDDADEAVKDADFIYTDVWYGL  235 (341)
T ss_pred             EEEECC--CCHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEECHHHHHCCCCEEEEHHHHHH
T ss_conf             887268--534488999999975998999879746899999999999999739979999788887257987851078886


Q ss_pred             HHHHHH-HHHHHHHCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             233344-4455542023575889998379985995589987687447679769970168687756999999999997781
Q gi|254780300|r  230 RIPRSL-IPSIREYKHVYSLDEKKLKYAKKDALVMHPGPINRNYEISSSVADGSQSIIQYQVEMGVAVRMAIIKELLENQ  308 (316)
Q Consensus       230 ~~~~~~-~~~~~~~~~~~~v~~~~l~~a~~~ai~mHcLP~~Rg~Ev~~~v~d~~~s~v~~Qa~Nrl~~~~AlL~~~l~~~  308 (316)
T Consensus       236 ~~~~~~~~~~~~~~~~~y~v~~~~m~~a~~~ai~MHplPa~Rg~EIs~eV~d~p~S~i~~QaeNgl~vrmAlL~~lL~~~  315 (341)
T PRK02255        236 YEQELSEEERMKIFYPKYQVNPELMAKAGPHAKFMHCLPASRGEEVTDEVMDSPQSIIFDEAENRLTAMRALLVYFLNPY  315 (341)
T ss_pred             HHHHHHHHHHHHHHCCCCEECHHHHHCCCCCCEEECCCCCCCCCEECHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             32165589998763446577799994589898998999898887307788589987799999730999999999984877


Q ss_pred             CC
Q ss_conf             42
Q gi|254780300|r  309 NK  310 (316)
Q Consensus       309 ~~  310 (316)
T Consensus       316 ~~  317 (341)
T PRK02255        316 IK  317 (341)
T ss_pred             CC
T ss_conf             76