HHsearch alignment for GI: 254780300 and conserved domain: PRK03515
>PRK03515 ornithine carbamoyltransferase subunit I; Provisional.
Probab=100.00 E-value=0 Score=659.74 Aligned_cols=302 Identities=23% Similarity=0.280 Sum_probs=279.6
Q ss_pred CCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 99777774178223899999999999999996442048775212897699996078733789999798761352111233
Q gi|254780300|r 1 MYSFPLYNFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQTSFEVAGKLLGVHVININT 80 (316)
Q Consensus 1 m~~f~~k~fL~~~dl~~~el~~ll~~A~~~k~~~~~~~~~~~~L~gk~~~~lF~kpStRTR~SFe~A~~~LGg~~i~l~~ 80 (316)
T Consensus 1 mn~~~~k~~l~~~Dls~~ei~~il~~A~~lK~~~~~~-~~~~~L~gk~i~~lF~epSTRTR~SFE~A~~~LGg~~i~l~~ 79 (334)
T PRK03515 1 MNQFYQKHFLKLLDFTPAELNALLQLAAKLKADKKSG-KEEQKLTGKNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGP 79 (334)
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC-CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEECC
T ss_conf 9988788847601199999999999999998676548-877567998899996488703799999999982992999677
Q ss_pred CCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC--CCCCC
Q ss_conf 3321013334224799987413671465203210055420012342111123456631223322222220122--21000
Q gi|254780300|r 81 KNSAMKKGENIADTIATLNALRPNIIVIRHPYSGAVNSLMHKIKGPSIINAGDGTHEHPSQALLDAFAIRHFK--GKISN 158 (316)
Q Consensus 81 ~~s~~~kgEs~~Dta~vls~~~~d~iv~R~~~~~~~~~~a~~~s~ppVINag~~~~~HP~Q~LaDl~Ti~e~~--g~l~~ 158 (316)
T Consensus 80 ~~s~~~kgEsl~DTarvLs~~-~D~Iv~R~~~~~~~~~~a~~s~vP-VIN-g~~~~~HPtQaL~Dl~Ti~E~~~~~~l~~ 156 (334)
T PRK03515 80 SGSQIGHKESIKDTARVLGRM-YDGIQYRGYGQEIVETLAEYAGVP-VWN-GLTNEFHPTQLLADLLTMQEHLPGKAFNE 156 (334)
T ss_pred CCCCCCCCCCHHHHHHHHHHC-CCEEEEECCCHHHHHHHHHHCCCC-EEE-CCCCCCCCHHHHHHHHHHHHHHCCCCCCC
T ss_conf 534366898789999999961-887999675548999999876987-664-89888786799999999999856897566
Q ss_pred CCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCC-----------CCCCCCCCCCCHHHCCCCCCEEEEEEEC
Q ss_conf 10010355443301334466420134205532775322211-----------2123433005845603686221000113
Q gi|254780300|r 159 LHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKD-----------ISNMGVEVFHDMQKGLKNVDVIMILRMQ 227 (316)
Q Consensus 159 l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~-----------~~~~~~~~~~d~~ea~~~aDvv~~~~~~ 227 (316)
T Consensus 157 lkia~vGD~-~nnv~~Sl~~~~~~~g~~~~~~~P~~~~p~~~~~~~~~~~~~~~g~~i~~~~d~~ea~~~aDviytd~w~ 235 (334)
T PRK03515 157 MTLAYAGDA-RNNMGNSLLEAAALTGLDLRLVAPKACWPEAALVTECQALAQKNGGNITLTEDIAEGVKGADFIYTDVWV 235 (334)
T ss_pred EEEEEECCC-CCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEECCHHHHHCCCCEEEEEHHH
T ss_conf 489995787-6545899999998549749997797568887899999999997199189960456551578788730213
Q ss_pred CHHHHHHHHHHHHHHCCCCCCCHHHHHHC-CCCCEEECCCCC------------------CCCCCCCHHHHCCCCCHHHH
Q ss_conf 31233344445554202357588999837-998599558998------------------76874476797699701686
Q gi|254780300|r 228 QERIPRSLIPSIREYKHVYSLDEKKLKYA-KKDALVMHPGPI------------------NRNYEISSSVADGSQSIIQY 288 (316)
Q Consensus 228 ~e~~~~~~~~~~~~~~~~~~v~~~~l~~a-~~~ai~mHcLP~------------------~Rg~Ev~~~v~d~~~s~v~~ 288 (316)
T Consensus 236 smg~~~~~~~er~~~~~~y~v~~~l~~~~~~~~~~~mHclPa~~~~~~~~~~~~~~~~p~~rG~EI~~~V~d~~~S~i~~ 315 (334)
T PRK03515 236 SMGEPKEKWAERIALLRDYQVNSKMMQLTGNPQVKFLHCLPAFHDDQTTLGKKMAEEYGLHGGMEVTDEVFESAASIVFD 315 (334)
T ss_pred HCCCHHHHHHHHHHHHHCCEECHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHCCCCCCCCCEECHHHHCCCCCHHHH
T ss_conf 22324666898987612525249999622799908957888775211100022202478888618788885788646999
Q ss_pred HHHHHHHHHHHHHHHHHCC
Q ss_conf 8775699999999999778
Q gi|254780300|r 289 QVEMGVAVRMAIIKELLEN 307 (316)
Q Consensus 289 Qa~Nrl~~~~AlL~~~l~~ 307 (316)
T Consensus 316 QaeNrl~~~~AvL~~~L~k 334 (334)
T PRK03515 316 QAENRLHTIKAVMVATLSK 334 (334)
T ss_pred HHHHHHHHHHHHHHHHHCC
T ss_conf 9870599999999998667