HHsearch alignment for GI: 254780300 and conserved domain: PRK04284
>PRK04284 ornithine carbamoyltransferase; Provisional.
Probab=100.00 E-value=0 Score=655.63 Aligned_cols=302 Identities=24% Similarity=0.295 Sum_probs=278.8
Q ss_pred CCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 99777774178223899999999999999996442048775212897699996078733789999798761352111233
Q gi|254780300|r 1 MYSFPLYNFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQTSFEVAGKLLGVHVININT 80 (316)
Q Consensus 1 m~~f~~k~fL~~~dl~~~el~~ll~~A~~~k~~~~~~~~~~~~L~gk~~~~lF~kpStRTR~SFe~A~~~LGg~~i~l~~ 80 (316)
T Consensus 1 m~~l~~rh~l~~~dls~~ei~~il~~A~~~k~~~~~~~-~~~~L~gk~v~~lF~epSTRTR~SFE~A~~~LGg~~i~l~~ 79 (332)
T PRK04284 1 MKNLRNRSFLTLLDFSRQEVEFLLTLSEDLKRAKYAGT-EKPMLKGKNIALLFEKDSTRTRCAFEVAAHDQGAHVTYLGP 79 (332)
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC-CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEECC
T ss_conf 97676888687110899999999999999975554588-78678999899996379720699999999985996898488
Q ss_pred CCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC-CCCCC
Q ss_conf 33210133342247999874136714652032100554200123421111234566312233222222201222-10001
Q gi|254780300|r 81 KNSAMKKGENIADTIATLNALRPNIIVIRHPYSGAVNSLMHKIKGPSIINAGDGTHEHPSQALLDAFAIRHFKG-KISNL 159 (316)
Q Consensus 81 ~~s~~~kgEs~~Dta~vls~~~~d~iv~R~~~~~~~~~~a~~~s~ppVINag~~~~~HP~Q~LaDl~Ti~e~~g-~l~~l 159 (316)
T Consensus 80 ~~s~~~kgEsi~DT~~vls~~-~D~iv~R~~~~~~~~~~a~~s~vP-ViN-g~~~~~HPtQ~L~D~~Ti~E~~~~~~~~l 156 (332)
T PRK04284 80 TGSQMGKKETTKDTARVLGGM-YDGIEYRGFSQRTVETLAEYSGVP-VWN-GLTDEDHPTQVLADFLTAKEVLKKPYADI 156 (332)
T ss_pred CCCCCCCCCCHHHHHHHHHHH-CCEEEEECCCHHHHHHHHHHCCCC-EEE-CCCCCCCCHHHHHHHHHHHHHHCCCCCCC
T ss_conf 645278877899999999962-888999534618999999867999-886-89987772689988899999713665672
Q ss_pred CEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCC-----------CCCCCCCCCCCHHHCCCCCCEEEEEEECC
Q ss_conf 0010355443301334466420134205532775322211-----------21234330058456036862210001133
Q gi|254780300|r 160 HIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKD-----------ISNMGVEVFHDMQKGLKNVDVIMILRMQQ 228 (316)
Q Consensus 160 ~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~-----------~~~~~~~~~~d~~ea~~~aDvv~~~~~~~ 228 (316)
T Consensus 157 kva~vGD~~-nnVa~S~~~~~~~~g~~~~~~~P~~~~p~~~~~~~~~~~~~~~g~~~~~~~d~~~av~~aDviytd~w~s 235 (332)
T PRK04284 157 NFTYVGDGR-NNVANALMQGAAIMGMNFHLVCPKELNPTDELLNRCKNIAAENGGNILITDDIDQGVKGSDVIYTDVWVS 235 (332)
T ss_pred EEEEECCCC-CCHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHCCCCEEEEEEEEE
T ss_conf 899967988-6511579999997599379975855588999999999999971990899514988852588998764431
Q ss_pred HHHHHHHHHHHHHHCCCCCCCHHHHHHCC-CCCEEECCCCCC-----------------CCCCCCHHHHCCCCCHHHHHH
Q ss_conf 12333444455542023575889998379-985995589987-----------------687447679769970168687
Q gi|254780300|r 229 ERIPRSLIPSIREYKHVYSLDEKKLKYAK-KDALVMHPGPIN-----------------RNYEISSSVADGSQSIIQYQV 290 (316)
Q Consensus 229 e~~~~~~~~~~~~~~~~~~v~~~~l~~a~-~~ai~mHcLP~~-----------------Rg~Ev~~~v~d~~~s~v~~Qa 290 (316)
T Consensus 236 ~~~~~~~~~~r~~~~~~y~v~~elm~~~~~~~~ifmHcLPa~~~~~~~~g~~~~~~~~~Rg~EIt~eV~d~~~S~if~QA 315 (332)
T PRK04284 236 MGEPDEVWKERIELLKPYQVTKEMMDKTGNPNVIFEHCLPSFHNADTKIGQQIFEKYGLREMEVTDEVFESKASVVFQEA 315 (332)
T ss_pred CCCCHHHHHHHHHHHHCCEECHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHCCCCCCCCCEECHHHHCCCCCEEHHHH
T ss_conf 57703557888866417477399997458989499788888875443223000003488686877889579874001085
Q ss_pred HHHHHHHHHHHHHHHCC
Q ss_conf 75699999999999778
Q gi|254780300|r 291 EMGVAVRMAIIKELLEN 307 (316)
Q Consensus 291 ~Nrl~~~~AlL~~~l~~ 307 (316)
T Consensus 316 eNrl~~~~AlL~~~LG~ 332 (332)
T PRK04284 316 ENRMHTIKAVMVATLGE 332 (332)
T ss_pred HCCHHHHHHHHHHHHCC
T ss_conf 44099999999997088