HHsearch results for GI: 254780300 and protein with PDBid: 1dxh_A
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=100.00 E-value=0 Score=613.07 Aligned_cols=302 Identities=22% Similarity=0.236 Sum_probs=276.3
Q ss_pred CCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 97777741782238999999999999999964420487752128976999960787337899997987613521112333
Q gi|254780300|r 2 YSFPLYNFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQTSFEVAGKLLGVHVININTK 81 (316)
Q Consensus 2 ~~f~~k~fL~~~dl~~~el~~ll~~A~~~k~~~~~~~~~~~~L~gk~~~~lF~kpStRTR~SFe~A~~~LGg~~i~l~~~ 81 (316)
.|+.+||||+++||+++||+.||++|.++|+.+.+... .+.|+||+++++|+|||||||+|||+|+.+|||++++++++
T Consensus 2 ~~m~~k~llsi~dls~~ei~~ll~~A~~lk~~~~~~~~-~~~L~gk~v~~lF~epSTRTR~SFe~A~~~LGg~~i~~~~~ 80 (335)
T 1dxh_A 2 FNMHNRNLLSLMHHSTRELRYLLDLSRDLKRAKYTGTE-QQHLKRKNIALIFEKTSTRTRCAFEVAAYDQGANVTYIDPN 80 (335)
T ss_dssp CCCTTCCBSSSTTCCHHHHHHHHHHHHHHHHHHHHTCC-CCCCTTCEEEEEESSCCHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCC-CCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEECCCC
T ss_conf 99999895770129999999999999999866645887-65579998999956897017999999999859909978853
Q ss_pred CCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCE
Q ss_conf 32101333422479998741367146520321005542001234211112345663122332222222012221000100
Q gi|254780300|r 82 NSAMKKGENIADTIATLNALRPNIIVIRHPYSGAVNSLMHKIKGPSIINAGDGTHEHPSQALLDAFAIRHFKGKISNLHI 161 (316)
Q Consensus 82 ~s~~~kgEs~~Dta~vls~~~~d~iv~R~~~~~~~~~~a~~~s~ppVINag~~~~~HP~Q~LaDl~Ti~e~~g~l~~l~i 161 (316)
+||++||||++||++|+|+| +|++++|++.++.+..+++++++| ||||+++ ++||||+|+|+|||+|++|.+.+.++
T Consensus 81 ~ss~~kgEsl~Dt~~~ls~y-~D~iviR~~~~~~~~~~a~~~~vP-VIN~~~~-~~HPtQaLlDl~Ti~e~~g~~~~~~~ 157 (335)
T 1dxh_A 81 SSQIGHKESMKDTARVLGRM-YDAIEYRGFKQEIVEELAKFAGVP-VFNGLTD-EYHPTQMLADVLTMREHSDKPLHDIS 157 (335)
T ss_dssp TCCBTTTBCHHHHHHHHHHH-CSEEEEECSCHHHHHHHHHHSSSC-EEEEECS-SCCHHHHHHHHHHHHHTCSSCGGGCE
T ss_pred CCCCCCCCCHHHHHHHHHHC-CCCEEEECHHHHHHHHHHHHCCCC-EEECCCC-CCCHHHHHHHHHHHHHHCCCCCCCCE
T ss_conf 34356674588999987622-560355410577799986414786-6626998-75556999999999986174436857
Q ss_pred EECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCC-----------CCCCCCCCCCHHHCCCCCCEEEEEEECCHH
Q ss_conf 103554433013344664201342055327753222112-----------123433005845603686221000113312
Q gi|254780300|r 162 AICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDI-----------SNMGVEVFHDMQKGLKNVDVIMILRMQQER 230 (316)
Q Consensus 162 a~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~-----------~~~~~~~~~d~~ea~~~aDvv~~~~~~~e~ 230 (316)
+++||..++||+||++.+++++|+++++++|+++.|.+. .+..+++++|++++++++||||+++|++|+
T Consensus 158 ~~~~~~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~~ea~~~aDvv~t~~~~~~~ 237 (335)
T 1dxh_A 158 YAYLGDARNNMGNSLLLIGAKLGMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTLTEDPKEAVKGVDFVHTDVWVSMG 237 (335)
T ss_dssp EEEESCCSSHHHHHHHHHHHHTTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEECCCSCSS
T ss_pred EEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHCCCCEEEEEEEEECC
T ss_conf 99856887651479999999779869996685457878999999999997499899984999983679889877777524
Q ss_pred HHHHHHHHHHHHCCCCCCCHHHHH-HCCCCCEEECCCCCC-------------------CCCCCCHHHHCCCCCHHHHHH
Q ss_conf 333444455542023575889998-379985995589987-------------------687447679769970168687
Q gi|254780300|r 231 IPRSLIPSIREYKHVYSLDEKKLK-YAKKDALVMHPGPIN-------------------RNYEISSSVADGSQSIIQYQV 290 (316)
Q Consensus 231 ~~~~~~~~~~~~~~~~~v~~~~l~-~a~~~ai~mHcLP~~-------------------Rg~Ev~~~v~d~~~s~v~~Qa 290 (316)
+..+......+++.+||||.++|+ .++++++||||||++ ||+||+++|+|+|+|+||+||
T Consensus 238 ~~~~~~~~~~~~~~~~~v~~e~l~~~a~~~~i~mH~lP~~~~~~~~~~~~~~~~~p~~~rg~Ei~~~v~d~p~s~i~~Qa 317 (335)
T 1dxh_A 238 EPVEAWGERIKELLPYQVNMEIMKATGNPRAKFMHCLPAFHNSETKVGKQIAEQYPNLANGIEVTEDVFESPYNIAFEQA 317 (335)
T ss_dssp SCGGGCHHHHHHHGGGCBCHHHHHTTCCSSCEEEECSCCCCSSSSHHHHHHHHHCGGGGGBSSBBHHHHTSTTBCHHHHH
T ss_pred CHHHHHHHHHHHHCCCEECHHHHHHCCCCCEEEECCCCCCCCHHHCCCCHHHHHCCCCCCCCEECHHHHCCCCCHHHHHH
T ss_conf 21333467776521223339999851799959968997764112102430133178888771865889579975799999
Q ss_pred HHHHHHHHHHHHHHHCC
Q ss_conf 75699999999999778
Q gi|254780300|r 291 EMGVAVRMAIIKELLEN 307 (316)
Q Consensus 291 ~Nrl~~~~AlL~~~l~~ 307 (316)
+||+|+|||||+++|++
T Consensus 318 ~Ng~~vrmAiL~~llg~ 334 (335)
T 1dxh_A 318 ENRMHTIKAILVSTLAD 334 (335)
T ss_dssp HHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHCC
T ss_conf 73499999999998615