HHsearch results for GI: 254780300 and protein with PDBid: 1gdh_A
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=96.43 E-value=0.005 Score=38.36 Aligned_cols=94 Identities=13% Similarity=0.157 Sum_probs=64.3
Q ss_pred CCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEE-EECCHHHHH
Q ss_conf 1000100103554433013344664201342055327753222112123433005845603686221000-113312333
Q gi|254780300|r 155 KISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDISNMGVEVFHDMQKGLKNVDVIMIL-RMQQERIPR 233 (316)
Q Consensus 155 ~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~d~~ea~~~aDvv~~~-~~~~e~~~~ 233 (316)
.+.|.++.++| .+++.......+..||+++....|...-.............++++.+..+|+|+.. ..-.
T Consensus 143 ~l~gk~vgIiG---~G~IG~~va~~l~~fg~~V~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~D~v~~~~plt~----- 214 (320)
T 1gdh_A 143 KLDNKTLGIYG---FGSIGQALAKRAQGFDMDIDYFDTHRASSSDEASYQATFHDSLDSLLSVSQFFSLNAPSTP----- 214 (320)
T ss_dssp CCTTCEEEEEC---CSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCCT-----
T ss_pred EECCCEEEEEE---ECHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCEECCCHHHHHHCCCEEEECCCCCH-----
T ss_conf 62598899981---6669999999987428768886687775455531263323779999623998998689982-----
Q ss_pred HHHHHHHHHCCCCCCCHHHHHHCCCCCEEECC
Q ss_conf 44445554202357588999837998599558
Q gi|254780300|r 234 SLIPSIREYKHVYSLDEKKLKYAKKDALVMHP 265 (316)
Q Consensus 234 ~~~~~~~~~~~~~~v~~~~l~~a~~~ai~mHc 265 (316)
+. ..-++.+.++.+|++++|.-.
T Consensus 215 -------~T--~~li~~~~l~~mk~~a~liN~ 237 (320)
T 1gdh_A 215 -------ET--RYFFNKATIKSLPQGAIVVNT 237 (320)
T ss_dssp -------TT--TTCBSHHHHTTSCTTEEEEEC
T ss_pred -------HH--HHEECHHHHHHCCCCEEEEEC
T ss_conf -------66--421189999437753799975