HHsearch results for GI: 254780300 and protein with PDBid: 2rgw_A
>2rgw_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, pyrimidine biosynthesis, thermostability; 2.80A {Methanococcus jannaschii} PDB: 3e2p_A
Probab=100.00 E-value=0 Score=624.74 Aligned_cols=295 Identities=33% Similarity=0.490 Sum_probs=269.9
Q ss_pred CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCC-CCCCC
Q ss_conf 77417822389999999999999999644204877521289769999607873378999979876135211123-33321
Q gi|254780300|r 6 LYNFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQTSFEVAGKLLGVHVININ-TKNSA 84 (316)
Q Consensus 6 ~k~fL~~~dl~~~el~~ll~~A~~~k~~~~~~~~~~~~L~gk~~~~lF~kpStRTR~SFe~A~~~LGg~~i~l~-~~~s~ 84 (316)
|||||+++||+++||..||++|.++|+.+.... ..+.|+||+++++|+|||||||+|||+|+.+|||++++++ .++++
T Consensus 1 Mkh~l~~~dls~~ei~~ll~~A~~lK~~~~~~~-~~~~L~gk~vallF~kpStRTR~SFe~A~~~LGg~~i~l~~~~~s~ 79 (306)
T 2rgw_A 1 MKHLISMKDIGKEEILEILDEARKMEELLNTKR-PLKLLEGKILATVFYEPSTRTRLSFETAMKRLGGEVITMTDLKSSS 79 (306)
T ss_dssp CCCBCCGGGCCHHHHHHHHHHHHHHHHHHHTTS-CCCTTTTCEEEEEESSCCHHHHHHHHHHHHHTTCEEEEECCSSTTT
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC-CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 988477000999999999999999988760699-7744699989998647875068899999998599621255431133
Q ss_pred CCCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEC
Q ss_conf 01333422479998741367146520321005542001234211112345663122332222222012221000100103
Q gi|254780300|r 85 MKKGENIADTIATLNALRPNIIVIRHPYSGAVNSLMHKIKGPSIINAGDGTHEHPSQALLDAFAIRHFKGKISNLHIAIC 164 (316)
Q Consensus 85 ~~kgEs~~Dta~vls~~~~d~iv~R~~~~~~~~~~a~~~s~ppVINag~~~~~HP~Q~LaDl~Ti~e~~g~l~~l~ia~v 164 (316)
+++||+++||++|+|+| +|+|++|++.++.+.++++++++| |||||+|..+||||+|+|++||+|++|+++|++|+|+
T Consensus 80 ~~~~Es~~Dta~vls~~-~d~iviR~~~~~~~~~~a~~~~vP-VINAg~~~~~HP~QaLaDl~Ti~E~~g~l~glki~~v 157 (306)
T 2rgw_A 80 VAKGESLIDTIRVISGY-ADIIVLRHPSEGAARLASEYSQVP-IINAGDGSNQHPTQTLLDLYTIMREIGRIDGIKIAFV 157 (306)
T ss_dssp TTTTCCHHHHHHHHHHH-CSEEEEECSSTTHHHHHHHHCSSC-EEECC----CCHHHHHHHHHHHHHHHSCSSSCEEEEE
T ss_pred CCCCCCHHHHHHHHCCC-CCEEEEECCCCCCCHHHHHCCCCC-EEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEE
T ss_conf 56871499999661446-856999722233135778627762-4527888766818999989999998588558889998
Q ss_pred CCCCCCCHHHHHHHHHHCC-CCEEEECCCCCCCCC-C------CCCCCCCCCCCHHHCCCCCCEEEEEEECCHHHHHHHH
Q ss_conf 5544330133446642013-420553277532221-1------2123433005845603686221000113312333444
Q gi|254780300|r 165 GDILHSRVARSDIMLLNTM-GARIRVIAPITLLPK-D------ISNMGVEVFHDMQKGLKNVDVIMILRMQQERIPRSLI 236 (316)
Q Consensus 165 GD~~~~~v~~S~~~~~~~~-g~~v~~~~P~~~~~~-~------~~~~~~~~~~d~~ea~~~aDvv~~~~~~~e~~~~~~~ 236 (316)
||+.||||+||++.+++.+ |+++++++|+++.+. . ..+..+.++++++++++++||||+++||+|++.+.
T Consensus 158 GD~~~~~v~~S~~~~~~~~~~~~v~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~aDvv~~~~~~~e~~~~~-- 235 (306)
T 2rgw_A 158 GDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVTRIQKERFPDP-- 235 (306)
T ss_dssp SCTTTCHHHHHHHHHHTTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEEESSGGGCCTTCSEEEECCCCGGGCSSH--
T ss_pred CCCCCCCHHHHHHHHHHHHCCCEEEEECCHHHCCCHHHHHHHHHCCCEEEEEHHHHHHHHHHEEEECCCCCCCCCCCH--
T ss_conf 056435317989999998489706986854754756777777623743675002554311110685224322468858--
Q ss_pred HHHHHHCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 4555420235758899983799859955899876874476797699701686877569999999999977814
Q gi|254780300|r 237 PSIREYKHVYSLDEKKLKYAKKDALVMHPGPINRNYEISSSVADGSQSIIQYQVEMGVAVRMAIIKELLENQN 309 (316)
Q Consensus 237 ~~~~~~~~~~~v~~~~l~~a~~~ai~mHcLP~~Rg~Ev~~~v~d~~~s~v~~Qa~Nrl~~~~AlL~~~l~~~~ 309 (316)
..+.+++.+||||.++|+ +++++|||||| ||+||+++|+|+|+|+||+||+||+|+|||||+++|+++.
T Consensus 236 ~~~~~~~~~~~v~~~~l~--~~~~i~mHclP--Rg~Ev~~~V~d~p~s~i~~QaeNrl~~~~AiL~~ll~~n~ 304 (306)
T 2rgw_A 236 NEYEKVKGSYKIKREYVE--GKKFIIMHPLP--RVDEIDYDVDDLPQAKYFKQSFYGIPVRMAILKKLIEDNE 304 (306)
T ss_dssp HHHHHHHHHHCBCHHHHT--TCSCEEECCSC--CSSSBCGGGTTSTTBCHHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHCCHHHHHHHHC--CCCCEEECCCC--CCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 899987263788999716--99989959998--8884488773687368999998639999999999972468