HHsearch results for GI: 254780300 and protein with PDBid: 3csu_A
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli K12} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=100.00 E-value=0 Score=629.61 Aligned_cols=298 Identities=30% Similarity=0.444 Sum_probs=268.2
Q ss_pred CCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCC-
Q ss_conf 9777774178223899999999999999996442048775212897699996078733789999798761352111233-
Q gi|254780300|r 2 YSFPLYNFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQTSFEVAGKLLGVHVININT- 80 (316)
Q Consensus 2 ~~f~~k~fL~~~dl~~~el~~ll~~A~~~k~~~~~~~~~~~~L~gk~~~~lF~kpStRTR~SFe~A~~~LGg~~i~l~~- 80 (316)
++|.|||||+++||+++|+..||++|.++|+.+ ..+.|+||+++++|+|||||||+|||+||.+|||++++++.
T Consensus 2 n~l~~rh~l~i~dls~~ei~~ll~~A~~lK~~~-----~~~~L~gk~iallF~kpSTRTR~SFe~A~~~LGg~~~~~~~~ 76 (310)
T 3csu_A 2 NPLYQKHIISINDLSRDDLNLVLATAAKLKANP-----QPELLKHKVIASCFFEASTRTRLSFETSMHRLGASVVGFSDS 76 (310)
T ss_dssp CTTTTCCBCCGGGCCHHHHHHHHHHHHHHHHSC-----CTTTTTTCEEEEEESSCCHHHHHHHHHHHHTTTCEEEEESCC
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC-----CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 988788858700099999999999999987589-----875578998999862787443999999999919960225766
Q ss_pred -CCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
Q ss_conf -3321013334224799987413671465203210055420012342111123456631223322222220122210001
Q gi|254780300|r 81 -KNSAMKKGENIADTIATLNALRPNIIVIRHPYSGAVNSLMHKIKGPSIINAGDGTHEHPSQALLDAFAIRHFKGKISNL 159 (316)
Q Consensus 81 -~~s~~~kgEs~~Dta~vls~~~~d~iv~R~~~~~~~~~~a~~~s~ppVINag~~~~~HP~Q~LaDl~Ti~e~~g~l~~l 159 (316)
..++.+||||++||++|+|+| .|+|++|++.++....++++++.+||||||+|..+||||+|+|++||+|++|+++|+
T Consensus 77 ~~~~~~~kgEs~~Dta~vls~~-~d~iv~R~~~~~~~~~~~~~~~~vPVINag~~~~~HPtQ~LaDl~Ti~e~~g~l~g~ 155 (310)
T 3csu_A 77 ANTSLGKKGETLADTISVISTY-VDAIVMRHPQEGAARLATEFSGNVPVLNAGDGSNQHPTQTLLDLFTIQETQGRLDNL 155 (310)
T ss_dssp -----CCSHHHHHHHHHHHTTT-CSEEEEEESSTTHHHHHHHHCTTCCEEEEEETTSCCHHHHHHHHHHHHHHHSCSSSC
T ss_pred CCCCCCCCCCCHHHHHHHHHCC-CCEEEEEECCCHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCC
T ss_conf 4322366875199987665404-760699842201458999837788767677887647188998788787642776898
Q ss_pred CEEECCCCCCCCHHHHHHHHHHCCC-CEEEECCCCCCCCCC-------CCCCCCCCCCCHHHCCCCCCEEEEEEECCHHH
Q ss_conf 0010355443301334466420134-205532775322211-------21234330058456036862210001133123
Q gi|254780300|r 160 HIAICGDILHSRVARSDIMLLNTMG-ARIRVIAPITLLPKD-------ISNMGVEVFHDMQKGLKNVDVIMILRMQQERI 231 (316)
Q Consensus 160 ~ia~vGD~~~~~v~~S~~~~~~~~g-~~v~~~~P~~~~~~~-------~~~~~~~~~~d~~ea~~~aDvv~~~~~~~e~~ 231 (316)
+|+|+||+.||||++|++.+++++| +++++++|+++.|.. ..+..+++++|+++++++||+||+++||.|+.
T Consensus 156 kv~~vGd~~~~~v~~S~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~d~~~a~~~aDvvy~~~~~~e~~ 235 (310)
T 3csu_A 156 HVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTRVQKERL 235 (310)
T ss_dssp EEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEECSCGGGTTTTCSEEEECC------
T ss_pred EEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHCCCCCEEEEEEHHHCCC
T ss_conf 79998468777147899999996163738984884137838999999861886533306776424787564200000234
Q ss_pred HHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 3344445554202357588999837998599558998768744767976997016868775699999999999778142
Q gi|254780300|r 232 PRSLIPSIREYKHVYSLDEKKLKYAKKDALVMHPGPINRNYEISSSVADGSQSIIQYQVEMGVAVRMAIIKELLENQNK 310 (316)
Q Consensus 232 ~~~~~~~~~~~~~~~~v~~~~l~~a~~~ai~mHcLP~~Rg~Ev~~~v~d~~~s~v~~Qa~Nrl~~~~AlL~~~l~~~~~ 310 (316)
... ...++...||||+++|+.++++++|||||| ||+||+++|+|+|+|+||+|||||+|+|||||+++|+.+-.
T Consensus 236 ~~~---~~~~~~~~~~v~~~~l~~a~~~~i~mHcLP--Rg~EV~~~V~d~p~S~v~~QaeNrl~~qkAlL~~ll~~~~~ 309 (310)
T 3csu_A 236 DPS---EYANVKAQFVLRASDLHNAKANMKVLHPLP--RVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLNRDLV 309 (310)
T ss_dssp --------------CCBCGGGGTTCCTTCEEECCSC--CSSSBCHHHHTSTTBCHHHHHHTHHHHHHHHHHHHHSSCCC
T ss_pred CCH---HHHHHHHHHHHHHHHHHCCCCCCEEEECCC--CCCEECHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 521---367788888867999963798939940899--96852287655886529999971399999999999785763