HHsearch results for GI: 254780300 and protein with PDBid: 3csu_A

>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli K12} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=100.00  E-value=0  Score=629.61  Aligned_cols=298  Identities=30%  Similarity=0.444  Sum_probs=268.2

Q ss_pred             CCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCC-
Q ss_conf             9777774178223899999999999999996442048775212897699996078733789999798761352111233-
Q gi|254780300|r    2 YSFPLYNFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQTSFEVAGKLLGVHVININT-   80 (316)
Q Consensus         2 ~~f~~k~fL~~~dl~~~el~~ll~~A~~~k~~~~~~~~~~~~L~gk~~~~lF~kpStRTR~SFe~A~~~LGg~~i~l~~-   80 (316)
                      ++|.|||||+++||+++|+..||++|.++|+.+     ..+.|+||+++++|+|||||||+|||+||.+|||++++++. 
T Consensus         2 n~l~~rh~l~i~dls~~ei~~ll~~A~~lK~~~-----~~~~L~gk~iallF~kpSTRTR~SFe~A~~~LGg~~~~~~~~   76 (310)
T 3csu_A            2 NPLYQKHIISINDLSRDDLNLVLATAAKLKANP-----QPELLKHKVIASCFFEASTRTRLSFETSMHRLGASVVGFSDS   76 (310)
T ss_dssp             CTTTTCCBCCGGGCCHHHHHHHHHHHHHHHHSC-----CTTTTTTCEEEEEESSCCHHHHHHHHHHHHTTTCEEEEESCC
T ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC-----CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCC
T ss_conf             988788858700099999999999999987589-----875578998999862787443999999999919960225766


Q ss_pred             -CCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
Q ss_conf             -3321013334224799987413671465203210055420012342111123456631223322222220122210001
Q gi|254780300|r   81 -KNSAMKKGENIADTIATLNALRPNIIVIRHPYSGAVNSLMHKIKGPSIINAGDGTHEHPSQALLDAFAIRHFKGKISNL  159 (316)
Q Consensus        81 -~~s~~~kgEs~~Dta~vls~~~~d~iv~R~~~~~~~~~~a~~~s~ppVINag~~~~~HP~Q~LaDl~Ti~e~~g~l~~l  159 (316)
                       ..++.+||||++||++|+|+| .|+|++|++.++....++++++.+||||||+|..+||||+|+|++||+|++|+++|+
T Consensus        77 ~~~~~~~kgEs~~Dta~vls~~-~d~iv~R~~~~~~~~~~~~~~~~vPVINag~~~~~HPtQ~LaDl~Ti~e~~g~l~g~  155 (310)
T 3csu_A           77 ANTSLGKKGETLADTISVISTY-VDAIVMRHPQEGAARLATEFSGNVPVLNAGDGSNQHPTQTLLDLFTIQETQGRLDNL  155 (310)
T ss_dssp             -----CCSHHHHHHHHHHHTTT-CSEEEEEESSTTHHHHHHHHCTTCCEEEEEETTSCCHHHHHHHHHHHHHHHSCSSSC
T ss_pred             CCCCCCCCCCCHHHHHHHHHCC-CCEEEEEECCCHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCC
T ss_conf             4322366875199987665404-760699842201458999837788767677887647188998788787642776898


Q ss_pred             CEEECCCCCCCCHHHHHHHHHHCCC-CEEEECCCCCCCCCC-------CCCCCCCCCCCHHHCCCCCCEEEEEEECCHHH
Q ss_conf             0010355443301334466420134-205532775322211-------21234330058456036862210001133123
Q gi|254780300|r  160 HIAICGDILHSRVARSDIMLLNTMG-ARIRVIAPITLLPKD-------ISNMGVEVFHDMQKGLKNVDVIMILRMQQERI  231 (316)
Q Consensus       160 ~ia~vGD~~~~~v~~S~~~~~~~~g-~~v~~~~P~~~~~~~-------~~~~~~~~~~d~~ea~~~aDvv~~~~~~~e~~  231 (316)
                      +|+|+||+.||||++|++.+++++| +++++++|+++.|..       ..+..+++++|+++++++||+||+++||.|+.
T Consensus       156 kv~~vGd~~~~~v~~S~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~d~~~a~~~aDvvy~~~~~~e~~  235 (310)
T 3csu_A          156 HVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTRVQKERL  235 (310)
T ss_dssp             EEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEECSCGGGTTTTCSEEEECC------
T ss_pred             EEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHCCCCCEEEEEEHHHCCC
T ss_conf             79998468777147899999996163738984884137838999999861886533306776424787564200000234


Q ss_pred             HHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             3344445554202357588999837998599558998768744767976997016868775699999999999778142
Q gi|254780300|r  232 PRSLIPSIREYKHVYSLDEKKLKYAKKDALVMHPGPINRNYEISSSVADGSQSIIQYQVEMGVAVRMAIIKELLENQNK  310 (316)
Q Consensus       232 ~~~~~~~~~~~~~~~~v~~~~l~~a~~~ai~mHcLP~~Rg~Ev~~~v~d~~~s~v~~Qa~Nrl~~~~AlL~~~l~~~~~  310 (316)
                      ...   ...++...||||+++|+.++++++||||||  ||+||+++|+|+|+|+||+|||||+|+|||||+++|+.+-.
T Consensus       236 ~~~---~~~~~~~~~~v~~~~l~~a~~~~i~mHcLP--Rg~EV~~~V~d~p~S~v~~QaeNrl~~qkAlL~~ll~~~~~  309 (310)
T 3csu_A          236 DPS---EYANVKAQFVLRASDLHNAKANMKVLHPLP--RVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLNRDLV  309 (310)
T ss_dssp             --------------CCBCGGGGTTCCTTCEEECCSC--CSSSBCHHHHTSTTBCHHHHHHTHHHHHHHHHHHHHSSCCC
T ss_pred             CCH---HHHHHHHHHHHHHHHHHCCCCCCEEEECCC--CCCEECHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             521---367788888867999963798939940899--96852287655886529999971399999999999785763