HHsearch results for GI: 254780300 and protein with PDBid: 3d4o_A
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=95.89 E-value=0.012 Score=35.92 Aligned_cols=95 Identities=22% Similarity=0.237 Sum_probs=68.7
Q ss_pred HCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCC--CCCCCCCCCCHHHCCCCCCEEEEEEEC
Q ss_conf 012221000100103554433013344664201342055327753222112--123433005845603686221000113
Q gi|254780300|r 150 RHFKGKISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDI--SNMGVEVFHDMQKGLKNVDVIMILRMQ 227 (316)
Q Consensus 150 ~e~~g~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~--~~~~~~~~~d~~ea~~~aDvv~~~~~~ 227 (316)
......+.|.+++.+| .+++.......+..+|++++++.-..-..... .+..+..+.++.+.+.++|+|+...
T Consensus 147 ~~~~~~l~g~~v~i~G---~G~~g~~~~~~~~~~g~~v~v~~r~~~~~~~~~~~g~~~~~~~~l~~~~~~aDvvi~~~-- 221 (293)
T 3d4o_A 147 QHTDFTIHGANVAVLG---LGRVGMSVARKFAALGAKVKVGARESDLLARIAEMGMEPFHISKAAQELRDVDVCINTI-- 221 (293)
T ss_dssp HHCSSCSTTCEEEEEC---CSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEEEEGGGHHHHTTTCSEEEECC--
T ss_pred HHCCCCCCCCEEEEEC---CCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCEEEECCHHHHHHCCCCEEEECC--
T ss_conf 7378354787899988---88899999999997699799995773008999851883485330677757699999899--
Q ss_pred CHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEECC
Q ss_conf 31233344445554202357588999837998599558
Q gi|254780300|r 228 QERIPRSLIPSIREYKHVYSLDEKKLKYAKKDALVMHP 265 (316)
Q Consensus 228 ~e~~~~~~~~~~~~~~~~~~v~~~~l~~a~~~ai~mHc 265 (316)
+ ..-|+++.++..++++++...
T Consensus 222 ----p------------~~~i~~~~l~~~~~gaviiDv 243 (293)
T 3d4o_A 222 ----P------------ALVVTANVLAEMPSHTFVIDL 243 (293)
T ss_dssp ----S------------SCCBCHHHHHHSCTTCEEEEC
T ss_pred ----C------------CCCCCHHHHHHCCCCCEEEEE
T ss_conf ----9------------875889999728999799994