HHsearch results for GI: 254780300 and protein with PDBid: 3d6n_B
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal- binding, pyrimidine biosynthesis, zinc; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=100.00 E-value=0 Score=636.66 Aligned_cols=289 Identities=37% Similarity=0.596 Sum_probs=271.8
Q ss_pred CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 77417822389999999999999999644204877521289769999607873378999979876135211123333210
Q gi|254780300|r 6 LYNFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQTSFEVAGKLLGVHVININTKNSAM 85 (316)
Q Consensus 6 ~k~fL~~~dl~~~el~~ll~~A~~~k~~~~~~~~~~~~L~gk~~~~lF~kpStRTR~SFe~A~~~LGg~~i~l~~~~s~~ 85 (316)
|||||+++||+++|++.||++|.++|+.+. ...+|+++++|+|||||||+|||+|+++|||++++++++++|+
T Consensus 1 Mr~~l~~~dls~~ei~~ll~~A~~lk~~~~-------~~~~k~~~llF~kpSTRTR~SFe~A~~~LGg~~i~l~~~~~~~ 73 (291)
T 3d6n_B 1 MRSLISSLDLTREEVEEILKYAKEFKEGKE-------ETIKASAVLFFSEPSTRTRLSFEKAARELGIETYLVSGSESST 73 (291)
T ss_dssp CCCBCCGGGCCHHHHHHHHHHHHHHHTTCC-------CCCCCEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEETTTTSC
T ss_pred CCCCCCHHHCCHHHHHHHHHHHHHHHHCCH-------HCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEEECCCCCCCC
T ss_conf 987277022999999999999999972620-------0368738999808974389999999998699889677111126
Q ss_pred CCCCCCCCHHHHHHHHCCCCEEEECCC-CCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEC
Q ss_conf 133342247999874136714652032-1005542001234211112345663122332222222012221000100103
Q gi|254780300|r 86 KKGENIADTIATLNALRPNIIVIRHPY-SGAVNSLMHKIKGPSIINAGDGTHEHPSQALLDAFAIRHFKGKISNLHIAIC 164 (316)
Q Consensus 86 ~kgEs~~Dta~vls~~~~d~iv~R~~~-~~~~~~~a~~~s~ppVINag~~~~~HP~Q~LaDl~Ti~e~~g~l~~l~ia~v 164 (316)
+||||++||++|+++|++|++|+|++. +..+.++++++++| |||||+|.++||||+|+|++||+|++|.++|++|+|+
T Consensus 74 ~kgEs~~Dt~~vls~~~~d~iv~R~~~~~~~~~~~a~~~~vp-VINag~~~~~HPtQaLaDl~Ti~e~~g~l~~l~i~~v 152 (291)
T 3d6n_B 74 VKGESFFDTLKTFEGLGFDYVVFRVPFVFFPYKEIVKSLNLR-LVNAGDGTHQHPSQGLIDFFTIKEHFGEVKDLRVLYV 152 (291)
T ss_dssp CTTCCHHHHHHHHHHTTCSEEEEEESSCCCSCHHHHHTCSSE-EEEEEETTTBCHHHHHHHHHHHHHHHSCCTTCEEEEE
T ss_pred CCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCCC-EEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEE
T ss_conf 678748899997532464389982454420089997327977-8988889776837899879899998398778659999
Q ss_pred CCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHCC
Q ss_conf 55443301334466420134205532775322211212343300584560368622100011331233344445554202
Q gi|254780300|r 165 GDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDISNMGVEVFHDMQKGLKNVDVIMILRMQQERIPRSLIPSIREYKH 244 (316)
Q Consensus 165 GD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~d~~ea~~~aDvv~~~~~~~e~~~~~~~~~~~~~~~ 244 (316)
||+.|+||+||++.+++++|+++++++|+++.|+.....++++++|++++++++|||||++||+|+..++.....++|+.
T Consensus 153 GD~~~~~v~~S~~~~~~~~g~~~~~~~P~~~~p~~~~~~~i~~~~d~~~ai~~aDvv~~~~~~~~~~~~~~~~~~~~~~~ 232 (291)
T 3d6n_B 153 GDIKHSRVFRSGAPLLNMFGAKIGVCGPKTLIPRDVEVFKVDVFDDVDKGIDWADVVIWLRLQKERQKENYIPSESSYFK 232 (291)
T ss_dssp SCCTTCHHHHHHHHHHHHTTCEEEEESCGGGSCTTGGGGCEEEESSHHHHHHHCSEEEECCCCTHHHHTTSSSCHHHHHH
T ss_pred ECCCCCHHHHHHHHHHHHCCCEEEEECCHHHCCCCHHHCCEEEECCHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHH
T ss_conf 46876689999999998569989998952437465302774897799999854899998244462010556677766788
Q ss_pred CCCCCHHHHHHCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 3575889998379985995589987687447679769970168687756999999999997
Q gi|254780300|r 245 VYSLDEKKLKYAKKDALVMHPGPINRNYEISSSVADGSQSIIQYQVEMGVAVRMAIIKELL 305 (316)
Q Consensus 245 ~~~v~~~~l~~a~~~ai~mHcLP~~Rg~Ev~~~v~d~~~s~v~~Qa~Nrl~~~~AlL~~~l 305 (316)
+||||.++|+. +++||||||++||+||+++|+|+|+|+||+||+||+|+|||||+|++
T Consensus 233 ~~~v~~~~~~~---~~i~mHcLPa~Rg~Ei~~~V~~~~~s~v~~QaeNrl~~~~AlL~~L~ 290 (291)
T 3d6n_B 233 QFGLTKERFEK---VKLYMHPGPVNRNVDIDHELVYTEKSLIQEQVKNGIPVRKAIYKFLW 290 (291)
T ss_dssp HHSBCHHHHTT---CCCEECSSCCCBTTTBCGGGSSSTTBCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHCCC---CCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHCCHHHHHHHHHHHH
T ss_conf 88888986578---99894899999888679768369855799999711999999999986