HHsearch results for GI: 254780300 and protein with PDBid: 3h9u_A
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, structural genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 1li4_A* 1a7a_A*
Probab=92.68 E-value=0.15 Score=28.68 Aligned_cols=128 Identities=19% Similarity=0.276 Sum_probs=76.9
Q ss_pred CCCCCCCCCCCCCC------CCHH-HHHHHHHHHHCCC-CCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCC
Q ss_conf 23421111234566------3122-3322222220122-21000100103554433013344664201342055327753
Q gi|254780300|r 123 IKGPSIINAGDGTH------EHPS-QALLDAFAIRHFK-GKISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPIT 194 (316)
Q Consensus 123 ~s~ppVINag~~~~------~HP~-Q~LaDl~Ti~e~~-g~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~ 194 (316)
...| |||.-|+.- -|=| |...|- |.+.- -.+.|.+++.+| ++.+-+.....+..+|++|+++.-+.
T Consensus 171 L~~P-vi~VNDs~tK~~fDN~yGtgqS~~d~--i~r~Tn~~laGk~vvV~G---YG~vGrGvA~~~rg~Ga~V~V~EvDP 244 (436)
T 3h9u_A 171 LTIP-AMNVNDSVTKSKFDNLYGCRESLVDG--IKRATDVMIAGKTACVCG---YGDVGKGCAAALRGFGARVVVTEVDP 244 (436)
T ss_dssp CCSC-EEECTTSHHHHTTHHHHHHHHHHHHH--HHHHHCCCCTTCEEEEEC---CSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCC-EEEECCCCCCCHHCCEEEECHHHHHH--HHHHCCCCCCCCEEEEEC---CCCCCHHHHHHHCCCCCEEEEEECCH
T ss_conf 7886-69845732031212305642229999--998608775786799955---55203237888535998899993681
Q ss_pred C--CCCCCCCCCCCCCCCHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEECCCCCCCCC
Q ss_conf 2--22112123433005845603686221000113312333444455542023575889998379985995589987687
Q gi|254780300|r 195 L--LPKDISNMGVEVFHDMQKGLKNVDVIMILRMQQERIPRSLIPSIREYKHVYSLDEKKLKYAKKDALVMHPGPINRNY 272 (316)
Q Consensus 195 ~--~~~~~~~~~~~~~~d~~ea~~~aDvv~~~~~~~e~~~~~~~~~~~~~~~~~~v~~~~l~~a~~~ai~mHcLP~~Rg~ 272 (316)
. +..... |+++ ..++++++.+|++++..-.. --|+.+.|+.+|+++|+.-..- ...
T Consensus 245 i~aleA~md--Gf~V-~~~~~a~~~~DifvTaTGn~-----------------~vi~~eh~~~mKdgaIl~N~Gh--fd~ 302 (436)
T 3h9u_A 245 INALQAAME--GYQV-LLVEDVVEEAHIFVTTTGND-----------------DIITSEHFPRMRDDAIVCNIGH--FDT 302 (436)
T ss_dssp HHHHHHHHT--TCEE-CCHHHHTTTCSEEEECSSCS-----------------CSBCTTTGGGCCTTEEEEECSS--SGG
T ss_pred HHHHHHHHC--CCEE-CCHHHHHHHCCEEEEECCCC-----------------CCCCHHHHHHHHCCCEEEECCC--CCC
T ss_conf 888999863--8850-22999883489999946998-----------------7588999998757968993167--740
Q ss_pred CCCHHH
Q ss_conf 447679
Q gi|254780300|r 273 EISSSV 278 (316)
Q Consensus 273 Ev~~~v 278 (316)
||+-+.
T Consensus 303 EId~~~ 308 (436)
T 3h9u_A 303 EIQVAW 308 (436)
T ss_dssp GBCHHH
T ss_pred CCCHHH
T ss_conf 010887