HHsearch results for GI: 254780300 and protein with PDBid: 3h9u_A

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, structural genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 1li4_A* 1a7a_A*
Probab=92.68  E-value=0.15  Score=28.68  Aligned_cols=128  Identities=19%  Similarity=0.276  Sum_probs=76.9

Q ss_pred             CCCCCCCCCCCCCC------CCHH-HHHHHHHHHHCCC-CCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCC
Q ss_conf             23421111234566------3122-3322222220122-21000100103554433013344664201342055327753
Q gi|254780300|r  123 IKGPSIINAGDGTH------EHPS-QALLDAFAIRHFK-GKISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPIT  194 (316)
Q Consensus       123 ~s~ppVINag~~~~------~HP~-Q~LaDl~Ti~e~~-g~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~  194 (316)
                      ...| |||.-|+.-      -|=| |...|-  |.+.- -.+.|.+++.+|   ++.+-+.....+..+|++|+++.-+.
T Consensus       171 L~~P-vi~VNDs~tK~~fDN~yGtgqS~~d~--i~r~Tn~~laGk~vvV~G---YG~vGrGvA~~~rg~Ga~V~V~EvDP  244 (436)
T 3h9u_A          171 LTIP-AMNVNDSVTKSKFDNLYGCRESLVDG--IKRATDVMIAGKTACVCG---YGDVGKGCAAALRGFGARVVVTEVDP  244 (436)
T ss_dssp             CCSC-EEECTTSHHHHTTHHHHHHHHHHHHH--HHHHHCCCCTTCEEEEEC---CSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CCCC-EEEECCCCCCCHHCCEEEECHHHHHH--HHHHCCCCCCCCEEEEEC---CCCCCHHHHHHHCCCCCEEEEEECCH
T ss_conf             7886-69845732031212305642229999--998608775786799955---55203237888535998899993681


Q ss_pred             C--CCCCCCCCCCCCCCCHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEECCCCCCCCC
Q ss_conf             2--22112123433005845603686221000113312333444455542023575889998379985995589987687
Q gi|254780300|r  195 L--LPKDISNMGVEVFHDMQKGLKNVDVIMILRMQQERIPRSLIPSIREYKHVYSLDEKKLKYAKKDALVMHPGPINRNY  272 (316)
Q Consensus       195 ~--~~~~~~~~~~~~~~d~~ea~~~aDvv~~~~~~~e~~~~~~~~~~~~~~~~~~v~~~~l~~a~~~ai~mHcLP~~Rg~  272 (316)
                      .  +.....  |+++ ..++++++.+|++++..-..                 --|+.+.|+.+|+++|+.-..-  ...
T Consensus       245 i~aleA~md--Gf~V-~~~~~a~~~~DifvTaTGn~-----------------~vi~~eh~~~mKdgaIl~N~Gh--fd~  302 (436)
T 3h9u_A          245 INALQAAME--GYQV-LLVEDVVEEAHIFVTTTGND-----------------DIITSEHFPRMRDDAIVCNIGH--FDT  302 (436)
T ss_dssp             HHHHHHHHT--TCEE-CCHHHHTTTCSEEEECSSCS-----------------CSBCTTTGGGCCTTEEEEECSS--SGG
T ss_pred             HHHHHHHHC--CCEE-CCHHHHHHHCCEEEEECCCC-----------------CCCCHHHHHHHHCCCEEEECCC--CCC
T ss_conf             888999863--8850-22999883489999946998-----------------7588999998757968993167--740


Q ss_pred             CCCHHH
Q ss_conf             447679
Q gi|254780300|r  273 EISSSV  278 (316)
Q Consensus       273 Ev~~~v  278 (316)
                      ||+-+.
T Consensus       303 EId~~~  308 (436)
T 3h9u_A          303 EIQVAW  308 (436)
T ss_dssp             GBCHHH
T ss_pred             CCCHHH
T ss_conf             010887