HHsearch results for GI: 254780300 and protein with PDBid: 3jtm_A
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=97.08 E-value=0.0015 Score=41.72 Aligned_cols=92 Identities=17% Similarity=0.291 Sum_probs=65.2
Q ss_pred CCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEE-EECCHHHHH
Q ss_conf 1000100103554433013344664201342055327753222112123433005845603686221000-113312333
Q gi|254780300|r 155 KISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDISNMGVEVFHDMQKGLKNVDVIMIL-RMQQERIPR 233 (316)
Q Consensus 155 ~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~d~~ea~~~aDvv~~~-~~~~e~~~~ 233 (316)
.+.|.++.++| .+++.......+..||+++....|....+......++....++++.++.+|+|... ..-.
T Consensus 161 ~L~gk~vgIiG---~G~IG~~va~~l~~fgm~V~~~d~~~~~~~~~~~~~~~~~~~l~ell~~sDvI~l~~Plt~----- 232 (351)
T 3jtm_A 161 DLEGKTIGTVG---AGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFVEDLNEMLPKCDVIVINMPLTE----- 232 (351)
T ss_dssp CSTTCEEEEEC---CSHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHHCCEECSCHHHHGGGCSEEEECSCCCT-----
T ss_pred ECCCCEEEEEC---CCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCCCCCHHHHHHHCCEEEEECCCCC-----
T ss_conf 11587666777---4652999999998638867844587776666775196004789999854999999367874-----
Q ss_pred HHHHHHHHHCCCCCCCHHHHHHCCCCCEEE
Q ss_conf 444455542023575889998379985995
Q gi|254780300|r 234 SLIPSIREYKHVYSLDEKKLKYAKKDALVM 263 (316)
Q Consensus 234 ~~~~~~~~~~~~~~v~~~~l~~a~~~ai~m 263 (316)
+. ..-++.+.++.+|++++|-
T Consensus 233 -------~T--~~li~~~~~~~mk~~a~lI 253 (351)
T 3jtm_A 233 -------KT--RGMFNKELIGKLKKGVLIV 253 (351)
T ss_dssp -------TT--TTCBSHHHHHHSCTTEEEE
T ss_pred -------CC--CCCCCHHHHHHCCCCCEEE
T ss_conf -------33--2563999997379997899