HHsearch results for GI: 254780300 and protein with PDBid: 3k5p_A
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infectious disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=91.96 E-value=0.47 Score=25.53 Aligned_cols=89 Identities=19% Similarity=0.234 Sum_probs=59.1
Q ss_pred CCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEE-EECCHHHHHH
Q ss_conf 000100103554433013344664201342055327753222112123433005845603686221000-1133123334
Q gi|254780300|r 156 ISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDISNMGVEVFHDMQKGLKNVDVIMIL-RMQQERIPRS 234 (316)
Q Consensus 156 l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~d~~ea~~~aDvv~~~-~~~~e~~~~~ 234 (316)
+.+.++..+| .+++.......+..+|+++....|...... ..+....++++.++.+|+|..- ..-
T Consensus 154 l~~k~~giiG---~G~iG~~va~~~~~~g~~v~~~~~~~~~~~----~~~~~~~~L~ell~~sDiIslh~Plt------- 219 (416)
T 3k5p_A 154 VRGKTLGIVG---YGNIGSQVGNLAESLGMTVRYYDTSDKLQY----GNVKPAASLDELLKTSDVVSLHVPSS------- 219 (416)
T ss_dssp STTCEEEEEC---CSHHHHHHHHHHHHTTCEEEEECTTCCCCB----TTBEECSSHHHHHHHCSEEEECCCC--------
T ss_pred ECCEEEEEEE---CCCCCCEEEEECCCCCCEEEEECCCCCCHH----CCEEECCCHHHHHHHCCEEEECCCCC-------
T ss_conf 0460899981---266421112310135515776316544010----23121489999975288888714530-------
Q ss_pred HHHHHHHHCCCCCCCHHHHHHCCCCCEEECC
Q ss_conf 4445554202357588999837998599558
Q gi|254780300|r 235 LIPSIREYKHVYSLDEKKLKYAKKDALVMHP 265 (316)
Q Consensus 235 ~~~~~~~~~~~~~v~~~~l~~a~~~ai~mHc 265 (316)
.+. ..-++.+.++.+|++++|.-+
T Consensus 220 -----~~T--~~lIn~~~l~~mK~ga~lIN~ 243 (416)
T 3k5p_A 220 -----KST--SKLITEAKLRKMKKGAFLINN 243 (416)
T ss_dssp -----------CCBCHHHHHHSCTTEEEEEC
T ss_pred -----CCC--CCHHHHHHHHCCCCCCEEEEC
T ss_conf -----023--266689999508999868852