PSIBLAST alignment of GI: 254780300 and protein with PDB id: 1pvv

gi|40889330|pdb|1PVV|A Chain A, Refined Structure Of Pyrococcus Furiosus Ornithine Carbamoyltransferase At 1.87 A Length = 315

 Score =  218 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 76/314 (24%), Positives = 132/314 (42%), Gaps = 14/314 (4%)

Query: 3   SFPLYNFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQT 62
           S    + + ++D + +++  +L+ A   F+           L+G T   +F + STRT+ 
Sbjct: 4   SLAGRDLLCLQDYTAEEIWTILETAK-MFKIWQKIGKPHRLLEGKTLAMIFQKPSTRTRV 62

Query: 63  SFEVAGKLLGVHVININTKNSAMKKGENIADTIATLNALRPNIIVIRHPYSGAVNSLMHK 122
           SFEVA   LG H + +N ++  +++GE IADT   L+    + I+ R      V  L   
Sbjct: 63  SFEVAMAHLGGHALYLNAQDLQLRRGETIADTARVLSRYV-DAIMARVYDHKDVEDLAKY 121

Query: 123 IKGPSIINAGDGTHEHPSQALLDAFAIRHFKGKISNLHIAICGD---ILHSRVARSDIML 179
              P  +  G     HP QAL D   I   KG I  + +   GD   + HS +     + 
Sbjct: 122 ATVP--VINGLSDFSHPCQALADYMTIWEKKGTIKGVKVVYVGDGNNVAHSLMIAGTKLG 179

Query: 180 LNTMGARIRVIAPITLLPKDISNM------GVEVFHDMQKGLKNVDVIMILRMQQERIPR 233
            + + A      P   + K             E+ HD  K +K+ DVI            
Sbjct: 180 ADVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLHDPVKAVKDADVIYTDVWASMGQEA 239

Query: 234 SLIPSIREYKHVYSLDEKKLKYAKKDALVMHPGPINRNYEISSSVADGSQSIIQYQVEMG 293
                 R+    + +++  +K+AK D + MH  P +R  E++  V D   S++  Q E  
Sbjct: 240 -EAEERRKIFRPFQVNKDLVKHAKPDYMFMHCLPAHRGEEVTDDVIDSPNSVVWDQAENR 298

Query: 294 VAVRMAIIKELLEN 307
           +  + A++  ++  
Sbjct: 299 LHAQKAVLALVMGG 312