PSIBLAST alignment of GI: 254780300 and protein with PDB id: 1sku
>gi|47169156|pdb|1SKU|A Chain A, E. Coli Aspartate Transcarbamylase 240's Loop Mutant (K244n) Length = 310
>gi|47169158|pdb|1SKU|C Chain C, E. Coli Aspartate Transcarbamylase 240's Loop Mutant (K244n) Length = 310
Score = 172 bits (436), Expect = 6e-41, Method: Composition-based stats.
Identities = 83/315 (26%), Positives = 140/315 (44%), Gaps = 19/315 (6%)
Query: 2 YSFPLYNFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQ 61
+ +++ DLS D+N +L A + NP L+ + F E STRT+
Sbjct: 2 NPLYQKHIISINDLSRDDLNLVLATAAKLKA-----NPQPELLKHKVIASCFFEASTRTR 56
Query: 62 TSFEVAGKLLGVHVININTK-NSAMKKGENIADTIATLNALRPNIIVIRHPYSGAVNSLM 120
SFE + LG V+ + N+++ K ++ + + IV+RHP GA
Sbjct: 57 LSFETSMHRLGASVVGFSDSANTSLGKKGETLADTISVISTYVDAIVMRHPQEGAARLAT 116
Query: 121 HKIKGPSIINAGDGTHEHPSQALLDAFAIRHFKGKISNLHIAICGDILHSRVARSDIMLL 180
++NAGDG+++HP+Q LLD F I+ +G++ NLH+A+ GD+ + R S L
Sbjct: 117 EFSGNVPVLNAGDGSNQHPTQTLLDLFTIQETQGRLDNLHVAMVGDLKYGRTVHSLTQAL 176
Query: 181 NTMG-ARIRVIAPITLLPKDISNMG-------VEVFHDMQKGLKNVDVIMILRMQQERIP 232
R IAP L + +++ + VD++ + R+Q+ER+
Sbjct: 177 AKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTRVQKERLD 236
Query: 233 RSLIPSIREYKHVYSLDEKKLKYAKKDALVMHPGPINRNYEISSSVADGSQSIIQYQVEM 292
S ++ L L AK + V+HP P R EI++ V + Q
Sbjct: 237 PSEYANVNAQF---VLRASDLHNAKANMKVLHPLP--RVDEIATDVDKTPHAWYFQQAGN 291
Query: 293 GVAVRMAIIKELLEN 307
G+ R A++ +L
Sbjct: 292 GIFARQALLALVLNR 306