RPSBLAST alignment of GI: 254780300 and protein with PDBid: 1oth
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A Length = 321
Score = 202 bits (515), Expect = 7e-53
Identities = 60/316 (18%), Positives = 119/316 (37%), Gaps = 14/316 (4%)
Query: 8 NFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQTSFEVA 67
+ +T+K+ + +++ Y+L + + + LQG + +F + STRT+ S E
Sbjct: 8 DLLTLKNFTGEEIKYMLWLSADLKFRIKQKGEYLPLLQGKSLGMIFEKRSTRTRLSTETG 67
Query: 68 GKLLGVHVININTKNSAMKKGENIADTIATLNALRPNIIVIRHPYSGAVNSLMHKIKGPS 127
LLG H + T++ + E++ DT L+++ ++ + S
Sbjct: 68 FALLGGHPCFLTTQDIHLGVNESLTDTARVLSSMADAVLARVYKQSDLDTLAKEA---SI 124
Query: 128 IINAGDGTHEHPSQALLDAFAIRHFKGKISNLHIAICGD---ILHSRVARSDIMLLNTMG 184
I G HP Q L D ++ + L ++ GD ILHS + + ++
Sbjct: 125 PIINGLSDLYHPIQILADYLTLQEHYSSLKGLTLSWIGDGNNILHSIMMSAAKFGMHLQA 184
Query: 185 ARIRVIAPITLLPKDISNMG------VEVFHDMQKGLKNVDVIMILRMQQERIPRSLIPS 238
A + P + K + + +D + +V++
Sbjct: 185 ATPKGYEPDASVTKLAEQYAKENGTKLLLTNDPLEAAHGGNVLITDTWISMGREEE-KKK 243
Query: 239 IREYKHVYSLDEKKLKYAKKDALVMHPGPINRNYEISSSVADGSQSIIQYQVEMGVAVRM 298
+ Y + K K A D +H P + E+ V +S++ + E M
Sbjct: 244 RLQAFQGYQVTMKTAKVAASDWTFLHCLP-RKPEEVDDEVFYSPRSLVFPEAENRKWTIM 302
Query: 299 AIIKELLENQNKITQK 314
A++ LL + + QK
Sbjct: 303 AVMVSLLTDYSPQLQK 318