RPSBLAST alignment of GI: 254780300 and protein with PDBid: 1vlv

>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, JCSG, protein structure initiative, PSI; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1 Length = 325

 Score =  171 bits (434), Expect = 2e-43
 Identities = 61/310 (19%), Positives = 118/310 (38%), Gaps = 18/310 (5%)

Query: 8   NFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQTSFEVA 67
           + +T+ D S +++ YLLD + +  + ++     T R +G+T   +F + STRT+ +FE A
Sbjct: 21  SLLTLLDFSPEEIRYLLDISKQ-VKMENRSKLRTERFKGMTLAMIFEKRSTRTRLAFETA 79

Query: 68  GKLLGVHVININTKNSAMKKGENIADTIATLNALRPNIIVIRHPYSGAVNSLMHKIKGPS 127
               G H I ++  +  +   E++ DT   L  +   I+   +                 
Sbjct: 80  FAEEGGHPIFLSPNDIHLGAKESLEDTARVLGRMVDAIMFRGYKQETV---EKLAEYSGV 136

Query: 128 IINAGDGTHEHPSQALLDAFAIRHFKGKISNLHIAICGDILHSRVARSDIMLLNTMGARI 187
            +  G     HP+QAL D   I    G++      +      + VA S ++    MG   
Sbjct: 137 PVYNGLTDEFHPTQALADLMTIEENFGRLKG-VKVVFMGDTRNNVATSLMIACAKMGMNF 195

Query: 188 RVIAPITLLPKDISNMGVEVF-----------HDMQKGLKNVDVIMILRMQQERIPRSLI 236
               P  L P+       +              ++++ L   DV+    +          
Sbjct: 196 VACGPEELKPRSDVFKRCQEIVKETDGSVSFTSNLEEALAGADVVY-TDVWASMGEEDKE 254

Query: 237 PSIREYKHVYSLDEKKLKY-AKKDALVMHPGPINRNYEISSSVADGSQSIIQYQVEMGVA 295
                    Y ++E+ ++   K + + MH  P  +  E++  V +G QS +  + E    
Sbjct: 255 KERMALLKPYQVNERVMEMTGKSETIFMHCLPAVKGQEVTYEVIEGKQSRVWDEAENRKH 314

Query: 296 VRMAIIKELL 305
              A++   L
Sbjct: 315 TIKAVMIATL 324