RPSBLAST alignment of GI: 254780300 and protein with PDBid: 2ef0
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.00A {Thermus thermophilus HB8} Length = 301
Score = 185 bits (469), Expect = 1e-47
Identities = 58/299 (19%), Positives = 114/299 (38%), Gaps = 8/299 (2%)
Query: 8 NFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQTSFEVA 67
+ + +++ LLD A + +++ L+G LF + S RT+T+ EVA
Sbjct: 11 DLLDFSGYGPKELQALLDLAEQLKRERYRGED----LKGKVLALLFEKPSLRTRTTLEVA 66
Query: 68 GKLLGVHVININTKNSAMKKGENIADTIATLNALRPNIIVIRHPYSGAVNSLMHKIKGPS 127
LG H + ++ K + + E + D L I R V +L K P
Sbjct: 67 MVHLGGHAVYLDQKQVGIGEREPVRDVAKNLERFVEGI-AARVFRHETVEALARHAKVPV 125
Query: 128 IINAGDGTHEHPSQALLDAFAIRHFKGKISNLHIAICGDILHSRVARSDIMLLNTMGARI 187
+ D HP QAL D ++ G ++ L +A GD + + ++ L + R+
Sbjct: 126 VNALSD--RAHPLQALADLLTLKEVFGGLAGLEVAWVGDGNNVLNSLLEVAPLAGLKVRV 183
Query: 188 RVIAPITLLPKDISNMGVEVFHDMQKGLKNVDVIMILRMQQERIPRSLIPSIREYKHVYS 247
P + HD ++ + +R+++ +
Sbjct: 184 ATPKGYEPDPGLLKRANAFFTHDPKEAALGAHALYTDVWTSMGQEAEREKRLRDFQG-FQ 242
Query: 248 LDEKKLKYAKKDALVMHPGPINRNYEISSSVADGSQSIIQYQVEMGVAVRMAIIKELLE 306
++ + LK + + + +H P + E + G +S + Q E + A++ LL+
Sbjct: 243 VNGELLKLLRPEGVFLHCLPAHYGEETTEEAVHGPRSRVFDQAENRLHTAKAVLLTLLK 301